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    LOC101885996 zinc finger protein 595 [ Danio rerio (zebrafish) ]

    Gene ID: 101885996, updated on 12-Sep-2024

    Summary

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    Gene symbol
    LOC101885996
    Gene description
    zinc finger protein 595
    See related
    Ensembl:ENSDARG00000090942
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    all
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    Genomic context

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    See LOC101885996 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (72627883..72643101, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (70966779..70982023, complement)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene si:cabz01054394.6 Neighboring gene si:cabz01054394.7 Neighboring gene gastrula zinc finger protein XlCGF57.1 Neighboring gene NACHT, LRR and PYD domains-containing protein 3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    zinc finger protein 595

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      72627883..72643101 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005165008.5 → XP_005165065.1  zinc finger protein 595

      UniProtKB/TrEMBL
      A0A8M2BC64, E7F931
      Related
      ENSDARP00000147556.1, ENSDART00000193312.1
      Conserved Domains (3) summary
      COG5048
      Location:54 → 518
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:85 → 105
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:322 → 347
      zf-H2C2_2; Zinc-finger double domain

    2. XM_068220510.1 → XP_068076611.1  zinc finger protein 595

      Related
      ENSDARP00000106119.1, ENSDART00000130126.3

    RNA

    1. XR_011011350.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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