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    LOC101730888 uncharacterized LOC101730888 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 101730888, updated on 4-Nov-2024

    Summary

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    Official Symbol
    LOC101730888provided by Xenbase
    Official Full Name
    uncharacterized LOC101730888provided by Xenbase
    Primary source
    Xenbase:XB-GENE-29084907
    See related
    AllianceGenome:Xenbase:XB-GENE-29084907
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to be located in plasma membrane and side of membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See LOC101730888 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (19042371..19051904, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (10719658..10730049, complement)

    Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene htra serine peptidase 1 Neighboring gene pleckstrin homology domain containing A1 Neighboring gene transforming, acidic coiled-coil containing protein 2 Neighboring gene NSE4 homolog A, SMC5-SMC6 complex component

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in side of membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC101730888

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      19042371..19051904 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004915806.4 → XP_004915863.2  uncharacterized protein LOC101730888

      UniProtKB/TrEMBL
      A0A8J0R5T0
      Conserved Domains (1) summary
      cl10471
      Location:42 → 116
      LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
    Nucleotide Protein Strain
    Heading Accession and Version

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