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    unc80 unc-80 homolog, NALCN channel complex subunit [ Danio rerio (zebrafish) ]

    Gene ID: 100536734, updated on 27-Mar-2024

    Summary

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    Gene symbol
    unc80
    Gene description
    unc-80 homolog, NALCN channel complex subunit
    See related
    Ensembl:ENSDARG00000098290
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    65
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (16509125..16668376, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (16382029..16541464, complement)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene si:ch73-193c12.2 Neighboring gene proteasome 20S subunit beta 3 Neighboring gene nodal modulator Neighboring gene uncharacterized LOC100329517

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein unc-80 homolog
    Names
    unc-80 homolog, NALCN activator

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      16509125..16668376 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021477061.1 → XP_021332736.1  protein unc-80 homolog isoform X4

      UniProtKB/TrEMBL
      A0A8M9QAU7
      Conserved Domains (1) summary
      pfam15778
      Location:16 → 233
      UNC80; Cation channel complex component UNC80

    2. XM_017356597.2 → XP_017212086.1  protein unc-80 homolog isoform X9

      UniProtKB/TrEMBL
      A0A8M6YZP3

    3. XM_017356596.2 → XP_017212085.1  protein unc-80 homolog isoform X8

      UniProtKB/TrEMBL
      A0A8M6Z6V1
      Related
      ENSDARP00000154236.1, ENSDART00000190116.1

    4. XM_021477063.1 → XP_021332738.1  protein unc-80 homolog isoform X6

      UniProtKB/TrEMBL
      A0A8M9Q0B1
      Conserved Domains (1) summary
      pfam15778
      Location:16 → 233
      UNC80; Cation channel complex component UNC80

    5. XM_021477059.1 → XP_021332734.1  protein unc-80 homolog isoform X2

      UniProtKB/TrEMBL
      A0A8M9Q6N3
      Conserved Domains (1) summary
      pfam15778
      Location:16 → 233
      UNC80; Cation channel complex component UNC80

    6. XM_021477062.1 → XP_021332737.1  protein unc-80 homolog isoform X5

      UniProtKB/TrEMBL
      A0A8M9PMM9
      Conserved Domains (1) summary
      pfam15778
      Location:16 → 233
      UNC80; Cation channel complex component UNC80

    7. XM_021477060.1 → XP_021332735.1  protein unc-80 homolog isoform X3

      UniProtKB/TrEMBL
      A0A8M9QFV8
      Conserved Domains (1) summary
      pfam15778
      Location:16 → 233
      UNC80; Cation channel complex component UNC80

    8. XM_009302292.3 → XP_009300567.1  protein unc-80 homolog isoform X1

      UniProtKB/TrEMBL
      A0A8M3B3C0
      Conserved Domains (1) summary
      pfam15778
      Location:16 → 234
      UNC80; Cation channel complex component UNC80

    9. XM_021477064.1 → XP_021332739.1  protein unc-80 homolog isoform X7

      UniProtKB/TrEMBL
      A0A8M9Q6N7
    Nucleotide Protein
    Heading Accession and Version

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