U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    cacul1 CDK2-associated, cullin domain 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100497029, updated on 4-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    cacul1provided by Xenbase
    Official Full Name
    CDK2-associated, cullin domain 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5896294
    See related
    Ensembl:ENSXETG00000030536 AllianceGenome:Xenbase:XB-GENE-5896294
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to enable ubiquitin protein ligase binding activity. Predicted to act upstream of or within ubiquitin-dependent protein catabolic process. Orthologous to human CACUL1 (CDK2 associated cullin domain 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See cacul1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (6127519..6139692, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683419.1 (361540..372787)

    Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 204 member A Neighboring gene prolactin releasing hormone receptor Neighboring gene small nucleolar RNA SNORA54 Neighboring gene nanos homolog 1 Neighboring gene eukaryotic translation initiation factor 3 subunit A

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    CDK2-associated and cullin domain-containing protein 1
    Names
    uncharacterized protein C10orf46 homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      6127519..6139692 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004915735.4 → XP_004915792.1  CDK2-associated and cullin domain-containing protein 1

      UniProtKB/TrEMBL
      A0A7D9NMJ2
      Related
      ENSXETP00000103278.1, ENSXETT00000111036.1
      Conserved Domains (1) summary
      pfam00888
      Location:72 → 196
      Cullin; Cullin family
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials