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    LOC100495391 beta-1,4-galactosyltransferase galt-1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100495391, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LOC100495391provided by Xenbase
    Official Full Name
    beta-1,4-galactosyltransferase galt-1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-29082687
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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    Genomic context

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    See LOC100495391 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (4851686..4854754)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683427.1 (224580..227218)

    Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene Ral GEF with PH domain and SH3 binding motif 1 Neighboring gene uncharacterized LOC101732925 Neighboring gene uncharacterized LOC116406641 Neighboring gene angiopoietin like 2 Neighboring gene beta-1,4-galactosyltransferase galt-1-like Neighboring gene uncharacterized XB5947713

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    beta-1,4-galactosyltransferase galt-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      4851686..4854754
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002941966.5 → XP_002942012.2  beta-1,4-galactosyltransferase galt-1

      UniProtKB/TrEMBL
      A0A1B8Y6C1, A0A8J0QYB4
      Conserved Domains (1) summary
      pfam01697
      Location:166 → 420
      Glyco_transf_92; Glycosyltransferase family 92
    Nucleotide Protein Strain
    Heading Accession and Version

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