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    atp10a ATPase, class V, type 10A [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100494528, updated on 4-Nov-2024

    Summary

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    Official Symbol
    atp10aprovided by Xenbase
    Official Full Name
    ATPase, class V, type 10Aprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-6033735
    See related
    Ensembl:ENSXETG00000024302 AllianceGenome:Xenbase:XB-GENE-6033735
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and magnesium ion binding activity. Predicted to act upstream of or within phospholipid transport. Predicted to be located in membrane. Orthologous to human ATP10A (ATPase phospholipid transporting 10A (putative)). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See atp10a in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (113454765..113543103, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (109899990..109992833, complement)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) Neighboring gene uncharacterized LOC105946538 Neighboring gene gamma-aminobutyric acid (GABA) A receptor, beta 3 Neighboring gene gamma-aminobutyric acid (GABA) A receptor, alpha 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled intramembrane lipid transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phospholipid transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    probable phospholipid-transporting ATPase VA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      113454765..113543103 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002931642.5 → XP_002931688.2  probable phospholipid-transporting ATPase VA

      UniProtKB/TrEMBL
      A0A6I8QGU2, A0A6I8R410
      Related
      ENSXETP00000067763.2, ENSXETT00000079512.2
      Conserved Domains (1) summary
      cd02073
      Location:58 → 1182
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials