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    kcnmb3 potassium channel subfamily M regulatory beta subunit 3 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100493910, updated on 4-Nov-2024

    Summary

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    Official Symbol
    kcnmb3provided by Xenbase
    Official Full Name
    potassium channel subfamily M regulatory beta subunit 3provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5864898
    See related
    Ensembl:ENSXETG00000007254 AllianceGenome:Xenbase:XB-GENE-5864898
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to enable calcium-activated potassium channel activity. Predicted to act upstream of or within monoatomic ion transmembrane transport and potassium ion transport. Predicted to be located in membrane. Orthologous to human KCNMB3 (potassium calcium-activated channel subfamily M regulatory beta subunit 3). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See kcnmb3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (108931530..108955940)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (94946819..94960207, complement)

    Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene mitofusin 1 Neighboring gene zinc finger protein 639 Neighboring gene phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha Neighboring gene zinc finger matrin-type 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables calcium-activated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within potassium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    calcium-activated potassium channel subunit beta-3
    Names
    potassium large conductance calcium-activated channel, subfamily M beta member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      108931530..108955940
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031902159.1 → XP_031758019.1  calcium-activated potassium channel subunit beta-3 isoform X2

      UniProtKB/TrEMBL
      A0A8J1JJH5, F6V732
      Conserved Domains (1) summary
      pfam03185
      Location:98 → 290
      CaKB; Calcium-activated potassium channel, beta subunit

    2. XM_031902158.1 → XP_031758018.1  calcium-activated potassium channel subunit beta-3 isoform X1

      UniProtKB/TrEMBL
      A0A8J1JJH3, F6V732
      Related
      ENSXETP00000015760.5, ENSXETT00000015760.5
      Conserved Domains (1) summary
      pfam03185
      Location:119 → 311
      CaKB; Calcium-activated potassium channel, beta subunit

    3. XM_031902161.1 → XP_031758021.1  calcium-activated potassium channel subunit beta-3 isoform X5

      UniProtKB/TrEMBL
      A0A803K4Z9
      Related
      ENSXETP00000115433.1, ENSXETT00000124424.1
      Conserved Domains (1) summary
      pfam03185
      Location:40 → 232
      CaKB; Calcium-activated potassium channel, beta subunit

    4. XM_031902160.1 → XP_031758020.1  calcium-activated potassium channel subunit beta-3 isoform X4

      UniProtKB/TrEMBL
      A0A8J1JLX2, F6V732

    5. XM_002931554.4 → XP_002931600.1  calcium-activated potassium channel subunit beta-3 isoform X3

      UniProtKB/TrEMBL
      A0A6I8PXD2
      Related
      ENSXETP00000064396.1, ENSXETT00000090302.2
      Conserved Domains (1) summary
      pfam03185
      Location:65 → 257
      CaKB; Calcium-activated potassium channel, beta subunit
    Nucleotide Protein Strain
    Heading Accession and Version

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