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    LOC100493516 zinc finger protein 585A-like [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100493516, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LOC100493516provided by Xenbase
    Official Full Name
    zinc finger protein 585A-likeprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-29081751
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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    Genomic context

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    See LOC100493516 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (5933434..5951795)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (1197630..1245369)

    Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene gastrula zinc finger protein XlCGF26.1-like Neighboring gene oocyte zinc finger protein XlCOF6-like Neighboring gene gastrula zinc finger protein XlCGF58.1-like Neighboring gene zinc finger protein 665-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    zinc finger protein 585A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      5933434..5951795
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012965701.3 → XP_012821155.2  zinc finger protein 585A-like isoform X1

      UniProtKB/TrEMBL
      A0A8J0SR00
      Conserved Domains (2) summary
      COG5048
      Location:479 → 890
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:845 → 865
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_018094730.2 → XP_017950219.2  zinc finger protein 585A-like isoform X2

      UniProtKB/TrEMBL
      A0A8J0T1L0
      Conserved Domains (2) summary
      COG5048
      Location:407 → 818
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:773 → 793
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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