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    sec61g SEC61 translocon gamma subunit [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100492802, updated on 17-Aug-2024

    Summary

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    Official Symbol
    sec61gprovided by Xenbase
    Official Full Name
    SEC61 translocon gamma subunitprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-484989
    See related
    Ensembl:ENSXETG00000015843
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    sss1; sec61g-a; sec61g-b
    Orthologs
    human mouse all
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    Genomic context

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    See sec61g in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (56604019..56607811, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (65261582..65265483, complement)

    Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene contactin associated protein 2 Neighboring gene uncharacterized LOC116411499 Neighboring gene thiamin pyrophosphokinase 1 Neighboring gene epidermal growth factor receptor Neighboring gene LanC like glutathione S-transferase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables protein transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein targeting IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protein transport protein Sec61 subunit gamma

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      56604019..56607811 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004915364.4 → XP_004915421.1  protein transport protein Sec61 subunit gamma

      See identical proteins and their annotated locations for XP_004915421.1

      UniProtKB/TrEMBL
      F6TPF7
      Related
      ENSXETP00000034548.4, ENSXETT00000034548.4
      Conserved Domains (1) summary
      cl00481
      Location:12 → 66
      SecE; SecE/Sec61-gamma subunits of protein translocation complex
    Nucleotide Protein Strain
    Heading Accession and Version

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