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    vps26c VPS26 endosomal protein sorting factor C [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100492242, updated on 8-Mar-2024

    Summary

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    Official Symbol
    vps26cprovided by Xenbase
    Official Full Name
    VPS26 endosomal protein sorting factor Cprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-1009307
    See related
    Ensembl:ENSXETG00000013035
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    dcra; dscr3; dscra
    Orthologs
    human mouse all
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    Genomic context

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    See vps26c in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (12567466..12576142)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (8524365..8533792)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene potassium inwardly rectifying channel subfamily J member 6 Neighboring gene dual specificity tyrosine-(Y)-phosphorylation regulated kinase 1A Neighboring gene tetratricopeptide repeat domain 3 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class P

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    vacuolar protein sorting-associated protein 26C
    Names
    DSCR3 arrestin fold containing
    Down syndrome critical region 3
    Down syndrome critical region gene 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      12567466..12576142
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002941530.5 → XP_002941576.2  vacuolar protein sorting-associated protein 26C

      UniProtKB/TrEMBL
      A0A6I8QB02, A0A803K502
      Related
      ENSXETP00000115368.1, ENSXETT00000121503.1
      Conserved Domains (1) summary
      cl22903
      Location:22 → 304
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain
    Nucleotide Protein Strain
    Heading Accession and Version

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