U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    bphl biphenyl hydrolase-like (serine hydrolase) [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100489969, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    bphlprovided by Xenbase
    Official Full Name
    biphenyl hydrolase-like (serine hydrolase)provided by Xenbase
    Primary source
    Xenbase:XB-GENE-988291
    See related
    Ensembl:ENSXETG00000018034
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See bphl in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (87701665..87737064, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (50687553..50705531)

    Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 23 Neighboring gene proteasome (prosome, macropain) assembly chaperone 4 Neighboring gene ACD shelterin complex subunit and telomerase recruitment factor Neighboring gene tubulin beta 2B class IIb Neighboring gene serpin peptidase inhibitor, clade B (ovalbumin), member 4 Neighboring gene serpin peptidase inhibitor, clade B (ovalbumin), member 11

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    valacyclovir hydrolase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      87701665..87737064 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031904451.1 → XP_031760311.1  valacyclovir hydrolase

      UniProtKB/TrEMBL
      A0A8J1JUN4, F7ACC5
      Conserved Domains (1) summary
      COG0596
      Location:35 → 284
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

    2. XM_002936417.5 → XP_002936463.1  valacyclovir hydrolase

      See identical proteins and their annotated locations for XP_002936463.1

      UniProtKB/TrEMBL
      A0A8J1JUN4, F7ACC5
      Conserved Domains (1) summary
      COG0596
      Location:35 → 284
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

    3. XM_012965425.3 → XP_012820879.1  valacyclovir hydrolase

      See identical proteins and their annotated locations for XP_012820879.1

      UniProtKB/TrEMBL
      A0A8J1JUN4, F7ACC5
      Related
      ENSXETP00000039095.3, ENSXETT00000039095.4
      Conserved Domains (1) summary
      COG0596
      Location:35 → 284
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

    RNA

    1. XR_004223264.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.