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    elmo3 engulfment and cell motility 3 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100489944, updated on 4-Nov-2024

    Summary

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    Official Symbol
    elmo3provided by Xenbase
    Official Full Name
    engulfment and cell motility 3provided by Xenbase
    Primary source
    Xenbase:XB-GENE-6045193
    See related
    Ensembl:ENSXETG00000013823 AllianceGenome:Xenbase:XB-GENE-6045193
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    elmo-3
    Summary
    Predicted to enable SH3 domain binding activity. Predicted to act upstream of or within apoptotic process and phagocytosis. Orthologous to human ELMO3 (engulfment and cell motility 3). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See elmo3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (76475914..76499221, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (28429024..28451763, complement)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 208 Neighboring gene ubiquitin specific peptidase 1 Neighboring gene E2F transcription factor 4 Neighboring gene uncharacterized LOC100495401 Neighboring gene lactate dehydrogenase D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables SH3 domain binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within phagocytosis IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    engulfment and cell motility protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      76475914..76499221 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002931647.4 → XP_002931693.1  engulfment and cell motility protein 3

      UniProtKB/TrEMBL
      A0A6I8QPK6
      Related
      ENSXETP00000075098.2, ENSXETT00000100807.2
      Conserved Domains (3) summary
      cd13359
      Location:534 → 659
      PH_ELMO1_CED-12; Engulfment and cell motility protein 1 pleckstrin homology (PH) domain
      pfam04727
      Location:292 → 463
      ELMO_CED12; ELMO/CED-12 family
      pfam11841
      Location:115 → 267
      DUF3361; Domain of unknown function (DUF3361)
    Nucleotide Protein Strain
    Heading Accession and Version

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