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    spata4 spermatogenesis associated 4 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100488774, updated on 4-Nov-2024

    Summary

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    Official Symbol
    spata4provided by Xenbase
    Official Full Name
    spermatogenesis associated 4provided by Xenbase
    Primary source
    Xenbase:XB-GENE-983174
    See related
    Ensembl:ENSXETG00000038630 AllianceGenome:Xenbase:XB-GENE-983174
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Orthologous to human SPATA4 (spermatogenesis associated 4). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See spata4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (47817033..47824597)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (38571266..38578707)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene signal peptidase complex subunit 3 Neighboring gene ankyrin repeat and SOCS box containing 5 Neighboring gene WD repeat domain 17 Neighboring gene glycoprotein M6A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    spermatogenesis-associated protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      47817033..47824597
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002933324.5 → XP_002933370.3  spermatogenesis-associated protein 4

      UniProtKB/TrEMBL
      A0A6I8RLV9, A0A803J9K0
      Related
      ENSXETP00000104564.1, ENSXETT00000117874.1
      Conserved Domains (1) summary
      pfam06294
      Location:43 → 132
      CH_2; CH-like domain in sperm protein
    Nucleotide Protein Strain
    Heading Accession and Version

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