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    ssc4d scavenger receptor cysteine rich family, 4 domains [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100488350, updated on 8-Mar-2024

    Summary

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    Official Symbol
    ssc4dprovided by Xenbase
    Official Full Name
    scavenger receptor cysteine rich family, 4 domainsprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-951347
    See related
    Ensembl:ENSXETG00000031843
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    srcrb4d; s4d-srcrb; srcrb-s4d
    Orthologs
    human mouse all
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    Genomic context

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    See ssc4d in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (94346275..94360675, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (90238381..90256647, complement)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene heat shock protein family B (small) member 1 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma Neighboring gene uncharacterized LOC108645863 Neighboring gene RAD51 paralog D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    scavenger receptor cysteine-rich domain-containing group B protein
    Names
    scavenger receptor cysteine rich domain containing, group B (4 domains)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      94346275..94360675 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031896957.1 → XP_031752817.1  scavenger receptor cysteine-rich domain-containing group B protein

      UniProtKB/TrEMBL
      A0A6I8PL41
      Related
      ENSXETP00000058839.3, ENSXETT00000062910.3
      Conserved Domains (1) summary
      smart00202
      Location:51 → 151
      SR; Scavenger receptor Cys-rich
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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