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    rgs6 regulator of G-protein signaling 6 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100486845, updated on 17-Aug-2024

    Summary

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    Official Symbol
    rgs6provided by Xenbase
    Official Full Name
    regulator of G-protein signaling 6provided by Xenbase
    Primary source
    Xenbase:XB-GENE-954519
    See related
    Ensembl:ENSXETG00000021836
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    See rgs6 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (106522594..106716886, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (86228101..86423493, complement)

    Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene DDB1 and CUL4 associated factor 4 Neighboring gene D4, zinc and double PHD fingers, family 3 Neighboring gene uncharacterized LOC116406562 Neighboring gene signal induced proliferation associated 1 like 1 Neighboring gene pecanex 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within negative regulation of signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    regulator of G-protein signaling 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      106522594..106716886 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004917248.4 → XP_004917305.1  regulator of G-protein signaling 6 isoform X1

      See identical proteins and their annotated locations for XP_004917305.1

      UniProtKB/TrEMBL
      A0A6I8Q5T8, A0A6I8SPS5
      Conserved Domains (4) summary
      smart00224
      Location:257 → 318
      GGL; G protein gamma subunit-like motifs
      cd08737
      Location:327 → 451
      RGS_RGS6; Regulator of G protein signaling (RGS) domain found in the RGS6 protein
      cd04450
      Location:30 → 118
      DEP_RGS7-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in RGS (regulator of G-protein signaling) proteins of the subfamily R7. This subgroup contains RGS7, RGS6, RGS9 and RGS11. They share a common domain architecture, containing, beside the RGS domain, ...
      pfam18148
      Location:115 → 216
      RGS_DHEX; Regulator of G-protein signalling DHEX domain

    2. XM_002936882.5 → XP_002936928.1  regulator of G-protein signaling 6 isoform X2

      UniProtKB/TrEMBL
      A0A6I8SPS5, F6VG27
      Related
      ENSXETP00000047220.5, ENSXETT00000047220.5
      Conserved Domains (4) summary
      smart00224
      Location:257 → 318
      GGL; G protein gamma subunit-like motifs
      cd08737
      Location:327 → 451
      RGS_RGS6; Regulator of G protein signaling (RGS) domain found in the RGS6 protein
      cd04450
      Location:30 → 118
      DEP_RGS7-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in RGS (regulator of G-protein signaling) proteins of the subfamily R7. This subgroup contains RGS7, RGS6, RGS9 and RGS11. They share a common domain architecture, containing, beside the RGS domain, ...
      pfam18148
      Location:115 → 216
      RGS_DHEX; Regulator of G-protein signalling DHEX domain

    3. XM_012969437.3 → XP_012824891.1  regulator of G-protein signaling 6 isoform X1

      See identical proteins and their annotated locations for XP_012824891.1

      UniProtKB/TrEMBL
      A0A6I8Q5T8, A0A6I8SPS5
      Related
      ENSXETP00000064915.2, ENSXETT00000075601.2
      Conserved Domains (4) summary
      smart00224
      Location:257 → 318
      GGL; G protein gamma subunit-like motifs
      cd08737
      Location:327 → 451
      RGS_RGS6; Regulator of G protein signaling (RGS) domain found in the RGS6 protein
      cd04450
      Location:30 → 118
      DEP_RGS7-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in RGS (regulator of G-protein signaling) proteins of the subfamily R7. This subgroup contains RGS7, RGS6, RGS9 and RGS11. They share a common domain architecture, containing, beside the RGS domain, ...
      pfam18148
      Location:115 → 216
      RGS_DHEX; Regulator of G-protein signalling DHEX domain
    Nucleotide Protein Strain
    Heading Accession and Version

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