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    shkbp1 SH3KBP1 binding protein 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100486587, updated on 17-Aug-2024

    Summary

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    Official Symbol
    shkbp1provided by Xenbase
    Official Full Name
    SH3KBP1 binding protein 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5815250
    See related
    Ensembl:ENSXETG00000016934
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    See shkbp1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (78027971..78047686, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (56842790..56862859, complement)

    Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene estrogen-related receptor gamma-related Neighboring gene uncharacterized LOC101735137 Neighboring gene G protein-coupled receptor 4 like gene 1 Neighboring gene G protein-coupled receptor 4 like gene 2 Neighboring gene spectrin, beta, non-erythrocytic 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    SH3KBP1-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      78027971..78047686 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012969277.3 → XP_012824731.1  SH3KBP1-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8J0SWM6
      Conserved Domains (1) summary
      cl38908
      Location:9 → 111
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily

    2. XM_002938802.5 → XP_002938848.1  SH3KBP1-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A6I8QM61
      Related
      ENSXETP00000069629.2, ENSXETT00000070715.2
      Conserved Domains (1) summary
      cl38908
      Location:9 → 111
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily

    3. XM_012969278.3 → XP_012824732.1  SH3KBP1-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A6I8SXB4
      Related
      ENSXETP00000098074.2, ENSXETT00000069049.2
      Conserved Domains (2) summary
      smart00225
      Location:30 → 88
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cl02518
      Location:3 → 86
      BTB; BTB/POZ domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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