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    chst1l carbohydrate sulfotransferase 1 like [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100485856, updated on 17-Aug-2024

    Summary

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    Official Symbol
    chst1lprovided by Xenbase
    Official Full Name
    carbohydrate sulfotransferase 1 likeprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-29078027
    See related
    Ensembl:ENSXETG00000014798
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    chst16
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    Genomic context

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    See chst1l in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (15717155..15773744)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (12629218..12685101, complement)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene mitochondrial transcription termination factor 2 Neighboring gene uncharacterized LOC116409460 Neighboring gene transmembrane protein 263 Neighboring gene sirtuin (silent mating type information regulation 2 homolog) 3, gene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    carbohydrate sulfotransferase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      15717155..15773744
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002942201.5 → XP_002942247.1  carbohydrate sulfotransferase 1

      UniProtKB/TrEMBL
      A0A803K452, F7CH04
      Related
      ENSXETP00000115101.1, ENSXETT00000117803.1
      Conserved Domains (1) summary
      cl21551
      Location:202 → 387
      Sulfotransfer_3; Sulfotransferase family
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials