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    gfpt1 glutamine--fructose-6-phosphate transaminase 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100485575, updated on 17-Aug-2024

    Summary

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    Official Symbol
    gfpt1provided by Xenbase
    Official Full Name
    glutamine--fructose-6-phosphate transaminase 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-493902
    See related
    Ensembl:ENSXETG00000008199
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    gfat
    Orthologs
    human mouse all
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    Genomic context

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    See gfpt1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (122593952..122620418)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (111576189..111602652, complement)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene AP2 associated kinase 1 Neighboring gene NFU1 iron-sulfur cluster scaffold Neighboring gene ANTXR cell adhesion molecule 1 Neighboring gene gastrokine-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables carbohydrate derivative binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glutamine-fructose-6-phosphate transaminase (isomerizing) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables glutamine-fructose-6-phosphate transaminase (isomerizing) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within UDP-N-acetylglucosamine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in UDP-N-acetylglucosamine metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within carbohydrate derivative biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in fructose 6-phosphate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within glutamine metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein N-linked glycosylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      122593952..122620418
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002935303.5 → XP_002935349.1  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 isoform X1

      UniProtKB/TrEMBL
      F6R0B7
      Related
      ENSXETP00000017974.4, ENSXETT00000017974.5
      Conserved Domains (1) summary
      PLN02981
      Location:1 → 697
      PLN02981; glucosamine:fructose-6-phosphate aminotransferase

    2. XM_004915839.3 → XP_004915896.1  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 isoform X2

      UniProtKB/TrEMBL
      A0A6I8SX76
      Related
      ENSXETP00000097747.2, ENSXETT00000085244.2
      Conserved Domains (1) summary
      PLN02981
      Location:1 → 680
      PLN02981; glucosamine:fructose-6-phosphate aminotransferase
    Nucleotide Protein Strain
    Heading Accession and Version

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