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    LOC100380149 uncharacterized LOC100380149 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100380149, updated on 2-Mar-2024

    Summary

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    Gene symbol
    LOC100380149
    Gene description
    uncharacterized LOC100380149
    See related
    Ensembl:ENSXETG00000010058
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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    Genomic context

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    See LOC100380149 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (116685155..116698767, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (108662197..108676347, complement)

    Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, gamma subunit 6 Neighboring gene phosphatidylinositol transfer protein cytoplasmic 1 like Neighboring gene family with sequence similarity 83 member E Neighboring gene uncharacterized LOC100497104

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    axin-related protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      116685155..116698767 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004916332.4 → XP_004916389.1  axin-related protein isoform X2

      UniProtKB/TrEMBL
      A0A803JRP4, A0A8J0R5W6
      Conserved Domains (3) summary
      cd08707
      Location:73 → 189
      RGS_Axin; Regulator of G protein signaling (RGS) domain found in the Axin protein
      pfam00778
      Location:629 → 701
      DIX; DIX domain
      pfam08833
      Location:383 → 426
      Axin_b-cat_bind; Axin beta-catenin binding domain

    2. XM_002934995.5 → XP_002935041.1  axin-related protein isoform X1

      UniProtKB/TrEMBL
      A0A803JRP4, F7ABT6
      Related
      ENSXETP00000022214.4, ENSXETT00000022214.5
      Conserved Domains (3) summary
      cd08707
      Location:73 → 189
      RGS_Axin; Regulator of G protein signaling (RGS) domain found in the Axin protein
      pfam00778
      Location:630 → 702
      DIX; DIX domain
      pfam08833
      Location:383 → 426
      Axin_b-cat_bind; Axin beta-catenin binding domain
    Nucleotide Protein Strain
    Heading Accession and Version

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