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    n6amt1 N-6 adenine-specific DNA methyltransferase 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100380133, updated on 4-Nov-2024

    Summary

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    Official Symbol
    n6amt1provided by Xenbase
    Official Full Name
    N-6 adenine-specific DNA methyltransferase 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5899961
    See related
    Ensembl:ENSXETG00000041236 AllianceGenome:Xenbase:XB-GENE-5899961
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to enable methyltransferase activity and nucleic acid binding activity. Predicted to act upstream of or within methylation. Orthologous to human N6AMT1 (N-6 adenine-specific DNA methyltransferase 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See n6amt1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (57320668..57328746)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (47895943..47904213)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA68 Neighboring gene ribosomal protein L18a Neighboring gene nuclear transport factor 2-like export factor 2 Neighboring gene exportin, tRNA Neighboring gene transmembrane BAX inhibitor motif containing 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within methylation IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    methyltransferase N6AMT1
    Names
    N-6 adenine-specific DNA methyltransferase 1 (putative)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      57320668..57328746
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002941254.5 → XP_002941300.2  methyltransferase N6AMT1

      UniProtKB/TrEMBL
      A0A6I8SRY4
      Related
      ENSXETP00000097539.2, ENSXETT00000094648.2
      Conserved Domains (1) summary
      cl17173
      Location:17 → 208
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    2. XM_004912924.4 → XP_004912981.2  methyltransferase N6AMT1

      UniProtKB/TrEMBL
      A0A6I8SRY4
      Conserved Domains (1) summary
      cl17173
      Location:17 → 208
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    Nucleotide Protein Strain
    Heading Accession and Version

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