cacna2d3 calcium channel, voltage dependent, alpha2/delta subunit 3 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cacna2d3provided by ZNC
Official Full Name: calcium channel, voltage dependent, alpha2/delta subunit 3provided by ZNC
Primary source: ZFIN:ZDB-GENE-030616-133
See related: Ensembl:ENSDARG00000078760 AllianceGenome:ZFIN:ZDB-GENE-030616-133
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: dory; si:dz136d19.1; si:busm1-136d19.1; csi:busm1-136d19.1
Summary: Predicted to enable voltage-gated calcium channel activity. Acts upstream of or within habituation. Predicted to be located in membrane. Predicted to be part of voltage-gated calcium channel complex. Orthologous to human CACNA2D3 (calcium voltage-gated channel auxiliary subunit alpha2delta 3). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	11	NC_007122.7 (36688793..36765806, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	11	NC_007122.6 (36426812..36503839, complement)

Chromosome 11 - NC_007122.7 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

cacna2d3, a voltage-gated calcium channel subunit, functions in vertebrate habituation learning and the startle sensitivity threshold.
Title: cacna2d3, a voltage-gated calcium channel subunit, functions in vertebrate habituation learning and the startle sensitivity threshold.

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables calcium channel activity	IEA Inferred from Electronic Annotation more info
enables voltage-gated calcium channel activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within calcium ion transmembrane transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within calcium ion transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within habituation	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within monoatomic ion transmembrane transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within monoatomic ion transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
part_of monoatomic ion channel complex	IEA Inferred from Electronic Annotation more info
part_of voltage-gated calcium channel complex	IBA Inferred from Biological aspect of Ancestor more info

Preferred Names: calcium channel, voltage dependent, alpha2/delta subunit 3; voltage-dependent calcium channel subunit alpha-2/delta-3

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The following sections contain reference sequences that belong to a specific genome build. Explain

XM_068224415.1 → XP_068080516.1 voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X4
XM_068224414.1 → XP_068080515.1 voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X3

Related

ENSDARP00000139621.2, ENSDART00000163210.2
XM_068224413.1 → XP_068080514.1 voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X2

Related

ENSDARP00000001281.10, ENSDART00000002055.11
XM_068224412.1 → XP_068080513.1 voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1