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    ermp1 endoplasmic reticulum metallopeptidase 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100145630, updated on 4-Nov-2024

    Summary

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    Official Symbol
    ermp1provided by Xenbase
    Official Full Name
    endoplasmic reticulum metallopeptidase 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-984733
    See related
    Ensembl:ENSXETG00000000577 AllianceGenome:Xenbase:XB-GENE-984733
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to enable metalloexopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in endoplasmic reticulum membrane. Orthologous to human ERMP1 (endoplasmic reticulum metallopeptidase 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See ermp1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (126912613..126932414)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (114674189..114693750)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene frataxin Neighboring gene melan-A Neighboring gene RIC1 homolog, RAB6A GEF complex partner 1 Neighboring gene programmed cell death 1 ligand 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables metalloexopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    endoplasmic reticulum metallopeptidase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      126912613..126932414
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004910796.4 → XP_004910853.1  endoplasmic reticulum metallopeptidase 1

      UniProtKB/TrEMBL
      A0A5S6P313, A0A803KKL8, F7ESF7
      Related
      ENSXETP00000001265.5, ENSXETT00000001265.5
      Conserved Domains (1) summary
      cd03875
      Location:78 → 385
      M28_Fxna_like; M28 Zn-peptidase Endoplasmic reticulum metallopeptidase 1
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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