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    XB5850668 SULT2 family member [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100144919, updated on 4-Nov-2024

    Summary

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    Symbol
    XB5850668provided by Xenbase
    Full Name
    SULT2 family memberprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-5850669
    See related
    Ensembl:ENSXETG00000035763 AllianceGenome:Xenbase:XB-GENE-5850669
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to enable sulfotransferase activity. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See XB5850668 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (116907624..116922979, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (108867506..108881267, complement)

    Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100497104 Neighboring gene sulfotransferase 2B1 Neighboring gene provisional ortholog of sulfotransferase family 2B member 1 Neighboring gene sulfotransferase family 2A member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC100144919

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126496.1 → NP_001119968.1  uncharacterized protein LOC100144919

      See identical proteins and their annotated locations for NP_001119968.1

      Status: PREDICTED

      Source sequence(s)
      BC158158
      UniProtKB/TrEMBL
      A0A6I8PTM1, B0BLT9
      Related
      ENSXETP00000063736.2, ENSXETT00000066478.3
      Conserved Domains (1) summary
      pfam00685
      Location:31 → 276
      Sulfotransfer_1; Sulfotransferase domain

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      116907624..116922979 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012966043.3 → XP_012821497.1  uncharacterized protein LOC100144919 isoform X2

      UniProtKB/TrEMBL
      A0A6I8Q5R9, A0A8J0SST2
      Conserved Domains (1) summary
      pfam00685
      Location:31 → 277
      Sulfotransfer_1; Sulfotransferase domain

    2. XM_012966042.3 → XP_012821496.1  uncharacterized protein LOC100144919 isoform X1

      UniProtKB/TrEMBL
      A0A6I8Q5R9, A0A8J0SRI1
      Related
      ENSXETP00000067834.2, ENSXETT00000085857.2
      Conserved Domains (1) summary
      pfam00685
      Location:60 → 306
      Sulfotransfer_1; Sulfotransferase domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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