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    ccni2 cyclin I family, member 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100125081, updated on 4-Nov-2024

    Summary

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    Official Symbol
    ccni2provided by Xenbase
    Official Full Name
    cyclin I family, member 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5874358
    See related
    Ensembl:ENSXETG00000034722 AllianceGenome:Xenbase:XB-GENE-5874358
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Orthologous to human CCNI2 (cyclin I family member 2). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human all
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    Genomic context

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    See ccni2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (37958566..37972033, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (28544832..28558595, complement)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene sosondowah ankyrin repeat domain family member A Neighboring gene septin 8 Neighboring gene kinesin family member 3A Neighboring gene uncharacterized LOC108646271

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    cyclin-I2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001102993.1 → NP_001096463.1  cyclin-I2

      See identical proteins and their annotated locations for NP_001096463.1

      Status: PROVISIONAL

      Source sequence(s)
      BC136194
      UniProtKB/TrEMBL
      A0A6I8SAU2, A4IIX7
      Related
      ENSXETP00000091919.2, ENSXETT00000103992.2
      Conserved Domains (1) summary
      pfam00134
      Location:44 → 145
      Cyclin_N; Cyclin, N-terminal domain

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      37958566..37972033 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031897557.1 → XP_031753417.1  cyclin-I2 isoform X1

      UniProtKB/TrEMBL
      A0A6I8SAU2, A0A8J1J6C6
      Conserved Domains (1) summary
      cd20526
      Location:46 → 144
      CYCLIN_CCNI-like; cyclin box found in cyclin-I (CCNI) and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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