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    cdk17 cyclin-dependent kinase 17 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100101773, updated on 4-Nov-2024

    Summary

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    Official Symbol
    cdk17provided by Xenbase
    Official Full Name
    cyclin-dependent kinase 17provided by Xenbase
    Primary source
    Xenbase:XB-GENE-920552
    See related
    Ensembl:ENSXETG00000001892 AllianceGenome:Xenbase:XB-GENE-920552
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    pctk2; PCTAIRE2
    Summary
    Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to several human genes including DIDO1 (death inducer-obliterator 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See cdk17 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (50492592..50591255, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (40952137..41049823, complement)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105946821 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene ELK3, ETS transcription factor Neighboring gene CFAP54 cilia and flagella associated protein 54 Neighboring gene NEDD1 gamma-tubulin ring complex targeting factor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    cyclin-dependent kinase 17
    Names
    PCTAIRE protein kinase 2
    PCTAIRE-motif protein kinase 2
    NP_001093739.1
    XP_012813857.1
    XP_012813859.1
    XP_017947390.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100269.1 → NP_001093739.1  cyclin-dependent kinase 17

      See identical proteins and their annotated locations for NP_001093739.1

      Status: PROVISIONAL

      Source sequence(s)
      CR942344
      UniProtKB/TrEMBL
      A0A6I8RRL7, F6Z6S8, Q07FZ5
      Related
      ENSXETP00000004012.3, ENSXETT00000004012.5
      Conserved Domains (1) summary
      cd07872
      Location:130 → 438
      STKc_PCTAIRE2; Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      50492592..50591255 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012958405.3 → XP_012813859.1  cyclin-dependent kinase 17 isoform X3

      UniProtKB/TrEMBL
      A0A6I8RRL7, A0A8J0SHF5
      Conserved Domains (1) summary
      cd07872
      Location:162 → 470
      STKc_PCTAIRE2; Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

    2. XM_012958403.3 → XP_012813857.1  cyclin-dependent kinase 17 isoform X1

      UniProtKB/TrEMBL
      A0A6I8RRL7, A0A8J0SG87
      Related
      ENSXETP00000085375.2, ENSXETT00000097958.2
      Conserved Domains (1) summary
      cd07872
      Location:185 → 493
      STKc_PCTAIRE2; Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

    3. XM_018091901.2 → XP_017947390.1  cyclin-dependent kinase 17 isoform X2

      UniProtKB/TrEMBL
      A0A6I8RRL7, A0A6I8SKJ4
      Related
      ENSXETP00000092713.2, ENSXETT00000080681.2
    Nucleotide Protein Strain
    Heading Accession and Version

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