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    tmeff1 transmembrane protein with EGF like and two follistatin like domains 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100101772, updated on 8-Mar-2024

    Summary

    Official Symbol
    tmeff1provided by Xenbase
    Official Full Name
    transmembrane protein with EGF like and two follistatin like domains 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-876375
    See related
    Ensembl:ENSXETG00000027666
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    X7365; h7365
    Orthologs
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    Genomic context

    See tmeff1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (76531525..76670919, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (61673157..61814820)

    Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene dynein heavy chain 5, axonemal Neighboring gene caveolae associated protein 4 Neighboring gene solute carrier family 39 (zinc transporter), member 6 Neighboring gene actin binding transcription modulator

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100268.3NP_001093738.2  tomoregulin-1 precursor

      Status: VALIDATED

      Source sequence(s)
      BC135422, CR582469, CX391920, CX424739
      UniProtKB/TrEMBL
      A0A6I8R4B0, A0A8J0Q5X7, A4IH90
      Related
      ENSXETP00000075342.1, ENSXETT00000092284.2
      Conserved Domains (2) summary
      PHA02887
      Location:267303
      PHA02887; EGF-like protein; Provisional
      smart00280
      Location:90135
      KAZAL; Kazal type serine protease inhibitors

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      76531525..76670919 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)