U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    parp6 poly(ADP-ribose) polymerase family member 6 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100038271, updated on 4-Nov-2024

    Summary

    Official Symbol
    parp6provided by Xenbase
    Official Full Name
    poly(ADP-ribose) polymerase family member 6provided by Xenbase
    Primary source
    Xenbase:XB-GENE-985346
    See related
    Ensembl:ENSXETG00000005205 AllianceGenome:Xenbase:XB-GENE-985346
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to enable NAD+-protein poly-ADP-ribosyltransferase activity. Orthologous to human PARP6 (poly(ADP-ribose) polymerase family member 6). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See parp6 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (92107330..92143920)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (82460756..82508731)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene pyruvate kinase M1/2 Neighboring gene uncharacterized LOC116409759 Neighboring gene ariadne RBR E3 ubiquitin protein ligase 1 Neighboring gene Bardet-Biedl syndrome 4

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    protein mono-ADP-ribosyltransferase PARP6
    NP_001090857.1
    XP_012821300.1
    XP_031753367.1
    XP_031753369.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001097388.1NP_001090857.1  protein mono-ADP-ribosyltransferase PARP6

      See identical proteins and their annotated locations for NP_001090857.1

      Status: PROVISIONAL

      Source sequence(s)
      BC135211
      UniProtKB/TrEMBL
      A4IGR1, F6RIQ8, F6SKZ0
      Related
      ENSXETP00000045123.3, ENSXETT00000045123.5
      Conserved Domains (1) summary
      cd01341
      Location:461585
      ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      92107330..92143920
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031897509.1XP_031753369.1  protein mono-ADP-ribosyltransferase PARP6 isoform X3

      UniProtKB/TrEMBL
      A0A8J1J670
      Conserved Domains (1) summary
      cd01341
      Location:461559
      ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...
    2. XM_012965846.3XP_012821300.1  protein mono-ADP-ribosyltransferase PARP6 isoform X2

      UniProtKB/TrEMBL
      A0A8J0SPJ5
      Conserved Domains (1) summary
      cd01341
      Location:460584
      ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...
    3. XM_031897507.1XP_031753367.1  protein mono-ADP-ribosyltransferase PARP6 isoform X1

      UniProtKB/TrEMBL
      A4IGR1, F6RIQ8, F6SKZ0
      Conserved Domains (1) summary
      cd01341
      Location:461585
      ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...