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    PODANS_6_3960 hypothetical protein [ Podospora anserina S mat+ ]

    Gene ID: 6194332, updated on 17-May-2024

    Summary

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    Gene symbol
    PODANS_6_3960
    Gene description
    hypothetical protein
    Locus tag
    PODANS_6_3960
    See related
    FungiDB:PODANS_6_3960; VEuPathDB:PODANS_6_3960
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Podospora anserina S mat+ (strain: S mat+)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; Podospora
    Old locus tag
    PODANSg6928
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    Genomic context

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    See PODANS_6_3960 in Genome Data Viewer
    Location:
    chromosome: 6, map: unlocalized
    Exon count:
    1

    NW_001914857.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001914857.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome sequence of the model ascomycete fungus Podospora anserina. Espagne E, et al. Genome Biol, 2008. PMID 18460219, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tyrosine/serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001914857.1 Reference assembly

      Range
      116102..118267
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001909856.1 → XP_001909891.1  uncharacterized protein PODANS_6_3960 [Podospora anserina S mat+]

      See identical proteins and their annotated locations for XP_001909891.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B2B1P0
      Conserved Domains (1) summary
      cl21483
      Location:527 → 691
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    Nucleotide Protein
    Heading Accession and Version

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