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    LINJ_34_4100 conserved hypothetical protein [ Leishmania infantum JPCM5 ]

    Gene ID: 5072847, updated on 30-Oct-2024

    Summary

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    Gene symbol
    LINJ_34_4100
    Gene description
    conserved hypothetical protein
    Locus tag
    LINJ_34_4100
    Gene type
    protein coding
    RNA name
    conserved hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Leishmania infantum JPCM5 (strain: JPCM5)
    Lineage
    Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
    Orthologs
    Leishmania major all
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    Genomic context

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    Location:
    chromosome: 34
    Exon count:
    1
    Sequence:
    Chromosome: 34; NC_009418.2 (1623277..1623987)

    Chromosome 34 - NC_009418.2Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein Neighboring gene putative Unc104-like kinesin Neighboring gene hypothetical protein, unknown function Neighboring gene putative nucleolar protein family a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009418.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
    2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cullin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-like protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein neddylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    conserved hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009418.2 Reference assembly

      Range
      1623277..1623987
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001468730.1 → XP_001468767.1  conserved hypothetical protein [Leishmania infantum JPCM5]

      See identical proteins and their annotated locations for XP_001468767.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2K4Z5M5, A0A381MWN5, A0A6L0XRX3, A4IAJ8
      Conserved Domains (1) summary
      pfam03556
      Location:117 → 229
      Cullin_binding; Cullin binding
    Nucleotide Protein
    Heading Accession and Version

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