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    Tab2 TAK1-associated binding protein 2 [ Drosophila pseudoobscura ]

    Gene ID: 4805694, updated on 23-May-2024

    Summary

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    Gene symbol
    Tab2
    Gene description
    TAK1-associated binding protein 2
    See related
    EnsemblRapid:LOC4805694
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila pseudoobscura
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See Tab2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current UCI_Dpse_MV25 (GCF_009870125.1) 3 NC_046680.1 (22952923..22967387)

    Chromosome 3 - NC_046680.1Genomic Context describing neighboring genes Neighboring gene putative fatty acyl-CoA reductase CG8303 Neighboring gene uncharacterized LOC4805691 Neighboring gene uncharacterized LOC26532741 Neighboring gene putative fatty acyl-CoA reductase CG8306 Neighboring gene uncharacterized LOC117183585 Neighboring gene uncharacterized LOC6899105 Neighboring gene SH3 domain containing GRB2 like, endophilin-B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046680.1 Chromosome 3 Reference UCI_Dpse_MV25 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evaluation of different reference based annotation strategies using RNA-Seq - a case study in Drososphila pseudoobscura. Palmieri N, et al. PLoS One, 2012. PMID 23056304, Free PMC Article
    2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative uncharacterized protein DDB_G0271606

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCI_Dpse_MV25 Primary Assembly

    Genomic

    1. NC_046680.1 Reference UCI_Dpse_MV25 Primary Assembly

      Range
      22952923..22967387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015185329.2 → XP_015040815.1  putative uncharacterized protein DDB_G0271606 isoform X2

      UniProtKB/TrEMBL
      A0A6I8VGR0
      Related
      XP_015040815.1, XM_015185329.2
      Conserved Domains (3) summary
      smart00547
      Location:787 → 809
      ZnF_RBZ; Zinc finger domain
      cd14362
      Location:107 → 147
      CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
      sd00029
      Location:787 → 806
      zf-RanBP2; RanBP2-type Zn finger [structural motif]

    2. XM_015185327.2 → XP_015040813.2  putative uncharacterized protein DDB_G0271606 isoform X1

      UniProtKB/TrEMBL
      A0A6I8VGF7
      Related
      XP_015040813.2, XM_015185327.2
      Conserved Domains (3) summary
      smart00547
      Location:787 → 809
      ZnF_RBZ; Zinc finger domain
      cd14362
      Location:107 → 147
      CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
      sd00029
      Location:787 → 806
      zf-RanBP2; RanBP2-type Zn finger [structural motif]

    3. XM_015185328.2 → XP_015040814.2  putative uncharacterized protein DDB_G0271606 isoform X1

      UniProtKB/TrEMBL
      A0A6I8VGF7
      Related
      XP_015040814.2, XM_015185328.2
      Conserved Domains (3) summary
      smart00547
      Location:787 → 809
      ZnF_RBZ; Zinc finger domain
      cd14362
      Location:107 → 147
      CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
      sd00029
      Location:787 → 806
      zf-RanBP2; RanBP2-type Zn finger [structural motif]

    4. XM_001362015.5 → XP_001362052.3  putative uncharacterized protein DDB_G0271606 isoform X1

      UniProtKB/TrEMBL
      A0A6I8VGF7
      Related
      XP_001362052.3, XM_001362015.5
      Conserved Domains (3) summary
      smart00547
      Location:787 → 809
      ZnF_RBZ; Zinc finger domain
      cd14362
      Location:107 → 147
      CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
      sd00029
      Location:787 → 806
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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