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    arp6 Swr1 actin-like protein Arp6 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539564, updated on 18-Sep-2024

    Summary

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    Official Symbol
    arp6
    Official Full Name
    Swr1 actin-like protein Arp6
    Primary source
    PomBase:SPCC550.12
    Locus tag
    SPOM_SPCC550.12
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See arp6 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003421.2 (1211939..1213659)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene tRNA-Val Neighboring gene ncRNA Neighboring gene karyopherin Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Hsk1-Dfp1 kinase complex regulatory subunit Dfp1 Neighboring gene ncRNA Neighboring gene vigilin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Schizosaccharomyces pombe JmjC-protein, Msc1, prevents H2A.Z localization in centromeric and subtelomeric chromatin domains. Buchanan L, et al. PLoS Genet, 2009 Nov. PMID 19911051, Free PMC Article
    2. Histone variant H2A.Z regulates centromere silencing and chromosome segregation in fission yeast. Hou H, et al. J Biol Chem, 2010 Jan 15. PMID 19910462, Free PMC Article
    3. Widespread cotranslational formation of protein complexes. Duncan CD, et al. PLoS Genet, 2011 Dec. PMID 22144913, Free PMC Article
    4. Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment. Shevchenko A, et al. Genome Biol, 2008. PMID 19040720, Free PMC Article
    5. Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species. Beltrao P, et al. PLoS Biol, 2009 Jun 16. PMID 19547744, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables nucleosome binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in chromatin remodeling IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    involved_in transcription initiation-coupled chromatin remodeling IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of Swr1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Swr1 complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    Swr1 actin-like protein Arp6

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      1211939..1213659
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023095.3 → NP_588104.1  Swr1 actin-like protein Arp6 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588104.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94241
      Conserved Domains (2) summary
      smart00268
      Location:6 → 400
      ACTIN; Actin
      COG5277
      Location:1 → 399
      COG5277; Actin-related protein [Cytoskeleton]
    Nucleotide Protein
    Heading Accession and Version

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