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    LOC119170340 elongation of very long chain fatty acids protein AAEL008004-like [ Rhipicephalus microplus (southern cattle tick) ]

    Gene ID: 119170340, updated on 26-Mar-2024

    Summary

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    Gene symbol
    LOC119170340
    Gene description
    elongation of very long chain fatty acids protein AAEL008004-like
    See related
    VectorBase:LOC119170340; EnsemblRapid:LOC119170340
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rhipicephalus microplus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Boophilus
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    Genomic context

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    See LOC119170340 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current ASM1333972v1 (GCF_013339725.1) 5 NC_051169.1 (39679971..39681339)

    Chromosome 5 - NC_051169.1Genomic Context describing neighboring genes Neighboring gene elongation of very long chain fatty acids protein AAEL008004-like Neighboring gene elongation of very long chain fatty acids protein 4-like Neighboring gene elongation of very long chain fatty acids protein AAEL008004-like Neighboring gene elongation of very long chain fatty acids protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051169.1 Chromosome 5 Reference ASM1333972v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty acid elongase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid elongation, monounsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, polyunsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, saturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongation of very long chain fatty acids protein AAEL008004-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rhipicephalus microplus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1333972v1 Primary Assembly

    Genomic

    1. NC_051169.1 Reference ASM1333972v1 Primary Assembly

      Range
      39679971..39681339
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037421479.1 → XP_037277376.1  elongation of very long chain fatty acids protein AAEL008004-like

      UniProtKB/TrEMBL
      A0A9J6DUZ0
      Related
      XP_037277376.1, XM_037421479.1
      Conserved Domains (1) summary
      pfam01151
      Location:39 → 275
      ELO; GNS1/SUR4 family
    Nucleotide Protein
    Heading Accession and Version

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