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    LOC108997647 methyltransferase-like protein 23 [ Juglans regia (English walnut) ]

    Gene ID: 108997647, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC108997647
    Gene description
    methyltransferase-like protein 23
    Locus tag
    F2P56_024253
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Juglans regia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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    Genomic context

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    See LOC108997647 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current Walnut 2.0 (GCF_001411555.2) 11 NC_049911.1 (9966378..9969203)
    100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017443606.1 (520632..523441, complement)

    Chromosome 11 - NC_049911.1Genomic Context describing neighboring genes Neighboring gene la-related protein 1C-like Neighboring gene uncharacterized mitochondrial protein AtMg00860-like Neighboring gene peroxidase 64-like Neighboring gene pre-rRNA-processing protein esf1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    methyltransferase-like protein 23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Walnut 2.0 Primary Assembly

    Genomic

    1. NC_049911.1 Reference Walnut 2.0 Primary Assembly

      Range
      9966378..9969203
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018974006.2 → XP_018829551.1  methyltransferase-like protein 23

      UniProtKB/TrEMBL
      A0A2I4FD25, A0A833UBY2
      Conserved Domains (1) summary
      cl17173
      Location:33 → 178
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    Nucleotide Protein
    Heading Accession and Version

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