U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC103343368 uncharacterized LOC103343368 [ Prunus mume (Japanese apricot) ]

    Gene ID: 103343368, updated on 28-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC103343368
    Gene description
    uncharacterized LOC103343368
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Prunus mume
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC103343368 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current P.mume_V1.0 (GCF_000346735.1) Unplaced Scaffold NW_007362575.1 (3936..7106)

    NW_007362575.1Genomic Context describing neighboring genes Neighboring gene protein ACCELERATED CELL DEATH 6-like Neighboring gene photosystem I assembly protein Ycf3 Neighboring gene transfer RNA threonine (anticodon UGU)

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_007362575.1 Unplaced Scaffold Reference P.mume_V1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in CAAX-box protein processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC103343368

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Prunus mume Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.mume_V1.0 Primary Assembly

    Genomic

    1. NW_007362575.1 Reference P.mume_V1.0 Primary Assembly

      Range
      3936..7106
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008247030.2 → XP_008245252.1  uncharacterized protein LOC103343368 isoform X1

      Conserved Domains (2) summary
      COG1266
      Location:92 → 301
      YdiL; Membrane protease YdiL, CAAX protease family [Posttranslational modification, protein turnover, chaperones]
      pfam02517
      Location:216 → 299
      Abi; CAAX protease self-immunity

    2. XM_016797024.1 → XP_016652510.1  uncharacterized protein LOC103343368 isoform X2

    3. XM_016797025.1 → XP_016652511.1  uncharacterized protein LOC103343368 isoform X2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases