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    LOC121878940 glycerate kinase-like [ Homarus americanus (American lobster) ]

    Gene ID: 121878940, updated on 1-Jul-2024

    Summary

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    Gene symbol
    LOC121878940
    Gene description
    glycerate kinase-like
    Locus tag
    Hamer_G008764
    See related
    EnsemblRapid:LOC121878940
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Homarus americanus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Nephropoidea; Nephropidae; Homarus
    Also known as
    glyctk-L
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC121878940 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current GMGI_Hamer_2.0 (GCF_018991925.1) Unplaced Scaffold NW_024746161.1 (1303849..1353003)

    NW_024746161.1Genomic Context describing neighboring genes Neighboring gene mitochondrial carrier homolog 2-like Neighboring gene translocator protein-like Neighboring gene DNA helicase MCM8-like Neighboring gene WD repeat-containing protein 35-like Neighboring gene pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial-like Neighboring gene ran-specific GTPase-activating protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024746161 Unplaced Scaffold Reference GMGI_Hamer_2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Prediction of a neuropeptidome for the eyestalk ganglia of the lobster Homarus americanus using a tissue-specific de novo assembled transcriptome. Christie AE, et al. Gen Comp Endocrinol, 2017 Mar 1. PMID 27823957, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycerate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycerate kinase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Homarus americanus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GMGI_Hamer_2.0 Primary Assembly

    Genomic

    1. NW_024746161.1 Reference GMGI_Hamer_2.0 Primary Assembly

      Range
      1303849..1353003
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042385376.1 → XP_042241310.1  glycerate kinase-like isoform X1

      UniProtKB/TrEMBL
      A0A8J5JL08
      Related
      XP_042241310.1, XM_042385376.1
      Conserved Domains (1) summary
      COG2379
      Location:43 → 497
      GckA; Glycerate-2-kinase [Carbohydrate transport and metabolism]

    2. XM_042385380.1 → XP_042241314.1  glycerate kinase-like isoform X3

      UniProtKB/TrEMBL
      A0A8J5JL08
      Related
      XP_042241314.1, XM_042385380.1
      Conserved Domains (1) summary
      COG2379
      Location:43 → 438
      GckA; Glycerate-2-kinase [Carbohydrate transport and metabolism]

    3. XM_042385379.1 → XP_042241313.1  glycerate kinase-like isoform X3

      UniProtKB/TrEMBL
      A0A8J5JL08
      Related
      XP_042241313.1, XM_042385379.1
      Conserved Domains (1) summary
      COG2379
      Location:43 → 438
      GckA; Glycerate-2-kinase [Carbohydrate transport and metabolism]

    4. XM_042385378.1 → XP_042241312.1  glycerate kinase-like isoform X2

      UniProtKB/TrEMBL
      A0A8J5JL08
      Related
      XP_042241312.1, XM_042385378.1
      Conserved Domains (1) summary
      COG2379
      Location:43 → 531
      GckA; Glycerate-2-kinase [Carbohydrate transport and metabolism]

    5. XM_042385377.1 → XP_042241311.1  glycerate kinase-like isoform X1

      UniProtKB/TrEMBL
      A0A8J5JL08
      Related
      XP_042241311.1, XM_042385377.1
      Conserved Domains (1) summary
      COG2379
      Location:43 → 497
      GckA; Glycerate-2-kinase [Carbohydrate transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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