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    cp head protein [ Escherichia phage MS2 ]

    Gene ID: 1260899, updated on 18-Aug-2023

    Summary

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    Gene symbol
    cp
    Gene description
    head protein
    Locus tag
    MS2g2
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia phage MS2
    Lineage
    Viruses; Riboviria; Orthornavirae; Lenarviricota; Leviviricetes; Norzivirales; Fiersviridae; Emesvirus
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    Genomic context

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    Sequence:
    NC_001417.2 (1335..1727)

    NC_001417.2Genomic Context describing neighboring genes Neighboring gene head maturation protease Neighboring gene hypothetical protein Neighboring gene RNA replicase beta subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001417.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PRR1 coat protein binding to its RNA translational operator. Persson M, et al. Acta Crystallogr D Biol Crystallogr, 2013 Mar. PMID 23519411
    2. The impact of viral RNA on the association rates of capsid protein assembly: bacteriophage MS2 as a case study. Elsawy KM, et al. J Mol Biol, 2010 Jul 23. PMID 20562027
    3. Interactions of Escherichia coli RNA with bacteriophage MS2 coat protein: genomic SELEX. Shtatland T, et al. Nucleic Acids Res, 2000 Nov 1. PMID 11058143, Free PMC Article
    4. Structural constraints on the three-dimensional geometry of simple viruses: case studies of a new predictive tool. Keef T, et al. Acta Crystallogr A, 2013 Mar. PMID 23403965, Free PMC Article
    5. A-protein gene of bacteriophage MS2. Fiers W, et al. Nature, 1975 Jul 24. PMID 806810

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. When the MS2 capsid assembles, the conformation of bound RNA and its interaction with the PRR1 coat-protein dimer are similar in both small RNA phages PRR1 and phage MS2.
      Title: PRR1 coat protein binding to its RNA translational operator.
    2. A new concept in virus biology provides predictive information on structural constraints on coat protein and genome topography, revealing a previously unrecognized structural interdependence of the shapes and sizes of different viral components.
      Title: Structural constraints on the three-dimensional geometry of simple viruses: case studies of a new predictive tool.
    3. This study shows that translational repressor binding results in self-association of asymmetric (AB) dimers being inhibited, whilst association of AB with symmetric (CC) dimers is greatly enhanced.
      Title: The impact of viral RNA on the association rates of capsid protein assembly: bacteriophage MS2 as a case study.
    4. MS2 coat protein binds several Escherichia coli mRNAs in vitro
      Title: Interactions of Escherichia coli RNA with bacteriophage MS2 coat protein: genomic SELEX.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    head protein
    YP_009640125.1
    • coat protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001417.2 Reference assembly

      Range
      1335..1727
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009640125.1 head protein [Escherichia phage MS2]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P03612
      UniProtKB/TrEMBL
      A0A9F2IDJ2, C0M1L4, C0M1L8, C0M1M2, C0M1Y0, C0M212, C0M216, C0M220, C0M2L4, C0M2S8, C0M2U4, C0M309, C8XPD7, D0U1D6, F4ZWH9, G4WZU0
      Conserved Domains (1) summary
      PHA00026
      Location:2 → 130
      cp; coat protein
    Nucleotide Protein
    Heading Accession and Version

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