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    LOC113026014 enhancer of mRNA decapping 3 [ Astatotilapia calliptera (eastern happy) ]

    Gene ID: 113026014, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC113026014
    Gene description
    enhancer of mRNA decapping 3
    See related
    Ensembl:ENSACLG00000018776
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Astatotilapia calliptera
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
    Also known as
    edc3
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    Genomic context

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    See LOC113026014 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current fAstCal1.2 (GCF_900246225.1) 1 NC_039302.1 (31391612..31417483, complement)

    Chromosome 1 - NC_039302.1Genomic Context describing neighboring genes Neighboring gene complexin 3b Neighboring gene C-terminal Src kinase Neighboring gene cytochrome P450, family 1, subfamily A Neighboring gene collagen and calcium-binding EGF domain-containing protein 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_039302.1 Chromosome 1 Reference fAstCal1.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in P-body assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in deadenylation-independent decapping of nuclear-transcribed mRNA IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    enhancer of mRNA-decapping protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAstCal1.2 Primary Assembly

    Genomic

    1. NC_039302.1 Reference fAstCal1.2 Primary Assembly

      Range
      31391612..31417483 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026174394.1 → XP_026030179.1  enhancer of mRNA-decapping protein 3 isoform X2

      Conserved Domains (2) summary
      cd01737
      Location:2 → 65
      LSm16_N; Like-Sm protein 16, N-terminal domain
      pfam03853
      Location:216 → 380
      YjeF_N; YjeF-related protein N-terminus

    2. XM_026174377.1 → XP_026030162.1  enhancer of mRNA-decapping protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A3P8QEC4
      Related
      ENSACLP00000027626.1, ENSACLT00000028274.1

    3. XM_026174385.1 → XP_026030170.1  enhancer of mRNA-decapping protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A3P8QEC4
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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