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    lsm14aa LSM14A mRNA processing body assembly factor a [ Astatotilapia calliptera (eastern happy) ]

    Gene ID: 113024997, updated on 18-Sep-2024

    Summary

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    Gene symbol
    lsm14aa
    Gene description
    LSM14A mRNA processing body assembly factor a
    See related
    Ensembl:ENSACLG00000021578
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Astatotilapia calliptera
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
    Orthologs
    zebrafish all
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    Genomic context

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    See lsm14aa in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current fAstCal1.2 (GCF_900246225.1) 7 NC_039308.1 (491003..498040, complement)

    Chromosome 7 - NC_039308.1Genomic Context describing neighboring genes Neighboring gene M-phase phosphoprotein 6 Neighboring gene glucose-6-phosphate isomerase a Neighboring gene transcription initiation factor TFIID subunit 4-like Neighboring gene BTB/POZ domain-containing protein kctd15-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_039308.1 Chromosome 7 Reference fAstCal1.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in P-body assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in stress granule assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein LSM14 homolog A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAstCal1.2 Primary Assembly

    Genomic

    1. NC_039308.1 Reference fAstCal1.2 Primary Assembly

      Range
      491003..498040 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026172311.1 → XP_026028096.1  protein LSM14 homolog A-like

      UniProtKB/TrEMBL
      A0A3P8QS50
      Related
      ENSACLP00000031817.1, ENSACLT00000032561.1
      Conserved Domains (2) summary
      cd01736
      Location:4 → 77
      LSm14_N; Like-Sm protein 14, N-terminal domain
      pfam09532
      Location:243 → 359
      FDF; FDF domain
    Nucleotide Protein
    Heading Accession and Version

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