U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC107985978 uncharacterized LOC107985978 [ Homo sapiens (human) ]

    Gene ID: 107985978, updated on 17-Sep-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC107985978
    Gene description
    uncharacterized LOC107985978
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC107985978 in Genome Data Viewer
    Location:
    2q34
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (211020495..211098086)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (211501226..211578790)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene LANCL1 antisense RNA 1 Neighboring gene NANOG hESC enhancer GRCh37_chr2:211307490-211308075 Neighboring gene NANOG hESC enhancer GRCh37_chr2:211346110-211346611 Neighboring gene LanC like glutathione S-transferase 1 Neighboring gene NANOG hESC enhancer GRCh37_chr2:211405459-211406038 Neighboring gene CPS1 intron CAGE-defined high expression enhancer 1 Neighboring gene CPS1 intron CAGE-defined high expression enhancer 2 Neighboring gene carbamoyl-phosphate synthase 1 Neighboring gene CPS1 intronic transcript 1 Neighboring gene 5'-nucleotidase domain containing 2 pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr2:211994958-211995459 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:212092893-212093684 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:212093685-212094476 Neighboring gene ribosomal protein S27 pseudogene 10

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      211020495..211098086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001739867.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      211501226..211578790
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007072796.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases