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    LOC105375933 uncharacterized LOC105375933 [ Homo sapiens (human) ]

    Gene ID: 105375933, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105375933
    Gene description
    uncharacterized LOC105375933
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105375933 in Genome Data Viewer
    Location:
    8q21.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (85086802..85107862, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (85525205..85546495, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ACTB pseudogene 6 Neighboring gene joining chain of multimeric IgA and IgM pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27588 Neighboring gene solute carrier family 7 member 13 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27589 Neighboring gene leucine rich repeat and coiled-coil centrosomal protein 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27590 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19333 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19334 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27591 Neighboring gene E2F5 divergent transcript Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19335 Neighboring gene E2F transcription factor 5 Neighboring gene ribosomal biogenesis factor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      85086802..85107862 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_929117.3 RNA Sequence

    2. XR_929118.3 RNA Sequence

    3. XR_929119.3 RNA Sequence

    4. XR_929121.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      85525205..85546495 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007079182.1 RNA Sequence

    2. XR_007079183.1 RNA Sequence

    3. XR_007079181.1 RNA Sequence

    4. XR_007079180.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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