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    snai2 snail family transcriptional repressor 2 [ Anolis carolinensis (green anole) ]

    Gene ID: 100560272, updated on 8-Mar-2024

    Summary

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    Gene symbol
    snai2
    Gene description
    snail family transcriptional repressor 2
    See related
    Ensembl:ENSACAG00000012332
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anolis carolinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
    Orthologs
    human mouse all
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    Genomic context

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    See snai2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 4 NC_085844.1 (49704981..49709730)
    102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338754.1 (1067550..1072303)

    Chromosome 4 - NC_085844.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134298877 Neighboring gene uncharacterized LOC107983102 Neighboring gene uncharacterized LOC134298612 Neighboring gene chloride channel protein C Neighboring gene uncharacterized LOC103279489

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein SNAI2
    Names
    snail family zinc finger 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAnoCar3.1.pri

    Genomic

    1. NC_085844.1 Reference rAnoCar3.1.pri

      Range
      49704981..49709730
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003223506.4 → XP_003223554.1  zinc finger protein SNAI2

      UniProtKB/TrEMBL
      H9GIS1
      Related
      ENSACAP00000012079.2
      Conserved Domains (4) summary
      COG5048
      Location:38 → 258
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:187 → 207
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:213 → 235
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:200 → 223
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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