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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001300860.2 → NP_001287789.1 probable ATP-dependent RNA helicase DDX46 isoform 1
See identical proteins and their annotated locations for NP_001287789.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AC010301, BF244218, BK000565, BU608108
- Consensus CDS
-
CCDS75306.1
- UniProtKB/TrEMBL
- A0A0C4DG89, A8K6X3
- Related
- ENSP00000416534.2, ENST00000452510.7
- Conserved Domains (2) summary
-
- COG0513
Location:344 → 826
- SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
- cd17953
Location:361 → 582
- DEADc_DDX46; DEAD-box helicase domain of DEAD box protein 46
-
NM_014829.4 → NP_055644.2 probable ATP-dependent RNA helicase DDX46 isoform 2
See identical proteins and their annotated locations for NP_055644.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has an alternate splice site in the coding region but maintains the reading frame, compared to variant 1. The resulting isoform (2) lacks an internal aa, compared to isoform 1.
- Source sequence(s)
-
AC010301, BC012304, BF244218, BU608108
- Consensus CDS
-
CCDS34240.1
- UniProtKB/Swiss-Prot
- O94894, Q7L014, Q96EI0, Q9Y658
- UniProtKB/TrEMBL
-
A8K6X3
- Related
- ENSP00000346236.4, ENST00000354283.8
- Conserved Domains (3) summary
-
- COG0513
Location:344 → 826
- SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
- cd17953
Location:361 → 582
- DEADc_DDX46; DEAD-box helicase domain of DEAD box protein 46
- cd22473
Location:928 → 1030
- KH-I_DDX46; type I K homology (KH) RNA-binding domain found in DEAD box protein 46 (DDX46) and similar proteins
RNA
-
NR_125341.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an internal exon in the 5' region and has an additional exon in the central region, compared to variant 1. This variant is represented as non-coding because use of the 5'-most expected translation start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC010301, AK126011, BU608108