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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_008480.1Â RefSeqGene
- Range
-
5001..139659
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_234
mRNA and Protein(s)
-
NM_001308152.2 → NP_001295081.1  rho guanine nucleotide exchange factor 10 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon and uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AA758332, AB002292, AC019257, BC112926
- Consensus CDS
-
CCDS78297.1
- UniProtKB/TrEMBL
-
A0A2X0U4L4
- Related
- ENSP00000427909.1, ENST00000520359.5
- Conserved Domains (2) summary
-
- pfam00621
Location:366 → 544
- RhoGEF; RhoGEF domain
- cl17171
Location:576 → 640
- PH-like; Pleckstrin homology-like domain
-
NM_001308153.2 → NP_001295082.1  rho guanine nucleotide exchange factor 10 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate in-frame splice site in the 5' coding region, and contains an alternate exon in the 5' UTR and 5' coding region, which results in the use of an alternate start codon compared to variant 1. The encoded isoform (3) is longer and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AA758332, AB002292, AC019257, BC112926, CR749570
- Consensus CDS
-
CCDS78296.1
- UniProtKB/TrEMBL
-
A0A2X0U4L4
- Related
- ENSP00000431012.1, ENST00000518288.5
- Conserved Domains (2) summary
-
- pfam00621
Location:429 → 606
- RhoGEF; RhoGEF domain
- cl17171
Location:638 → 702
- PH-like; Pleckstrin homology-like domain
-
NM_014629.4 → NP_055444.2  rho guanine nucleotide exchange factor 10 isoform 1
See identical proteins and their annotated locations for NP_055444.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform (1).
- Source sequence(s)
-
AA758332, AB002292, AC019257, AI348138, CN307765
- Consensus CDS
-
CCDS34794.1
- UniProtKB/TrEMBL
-
A0A2X0U4L4
- Related
- ENSP00000340297.3, ENST00000349830.8
- Conserved Domains (2) summary
-
- pfam00621
Location:404 → 582
- RhoGEF; RhoGEF domain
- cl17171
Location:614 → 678
- PH-like; Pleckstrin homology-like domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11Â Reference GRCh38.p14 Primary Assembly
- Range
-
1823300..1958641
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047422457.1 → XP_047278413.1  rho guanine nucleotide exchange factor 10 isoform X10
-
XM_047422452.1 → XP_047278408.1  rho guanine nucleotide exchange factor 10 isoform X7
-
XM_047422450.1 → XP_047278406.1  rho guanine nucleotide exchange factor 10 isoform X4
-
XM_047422454.1 → XP_047278410.1  rho guanine nucleotide exchange factor 10 isoform X3
-
XM_047422456.1 → XP_047278412.1  rho guanine nucleotide exchange factor 10 isoform X9
-
XM_047422461.1 → XP_047278417.1  rho guanine nucleotide exchange factor 10 isoform X15
-
XM_005266041.5 → XP_005266098.1  rho guanine nucleotide exchange factor 10 isoform X4
See identical proteins and their annotated locations for XP_005266098.1
- UniProtKB/TrEMBL
-
A0A2X0U4L4
- Conserved Domains (3) summary
-
- cd00160
Location:398 → 582
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- PTZ00441
Location:3 → 250
- PTZ00441; sporozoite surface protein 2 (SSP2); Provisional
- cl17171
Location:615 → 679
- PH-like; Pleckstrin homology-like domain
-
XM_047422459.1 → XP_047278415.1  rho guanine nucleotide exchange factor 10 isoform X12
-
XM_047422455.1 → XP_047278411.1  rho guanine nucleotide exchange factor 10 isoform X9
-
XM_047422458.1 → XP_047278414.1  rho guanine nucleotide exchange factor 10 isoform X11
-
XM_017014003.2 → XP_016869492.1  rho guanine nucleotide exchange factor 10 isoform X2
- UniProtKB/Swiss-Prot
- O14665, O15013, Q2KHR8, Q68D55, Q8IWD9, Q8IY77
- UniProtKB/TrEMBL
-
A0A2X0U4L4
- Related
- ENSP00000381571.1, ENST00000398564.5
- Conserved Domains (2) summary
-
- pfam00621
Location:429 → 607
- RhoGEF; RhoGEF domain
- cl17171
Location:639 → 703
- PH-like; Pleckstrin homology-like domain
-
XM_047422449.1 → XP_047278405.1  rho guanine nucleotide exchange factor 10 isoform X3
-
XM_024447335.2 → XP_024303103.1  rho guanine nucleotide exchange factor 10 isoform X1
- UniProtKB/TrEMBL
-
A0A2X0U4L4
- Conserved Domains (3) summary
-
- cd00160
Location:426 → 610
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- PTZ00441
Location:27 → 278
- PTZ00441; sporozoite surface protein 2 (SSP2); Provisional
- cl17171
Location:643 → 707
- PH-like; Pleckstrin homology-like domain
-
XM_047422453.1 → XP_047278409.1  rho guanine nucleotide exchange factor 10 isoform X8
-
XM_011534768.1 → XP_011533070.1  rho guanine nucleotide exchange factor 10 isoform X6
See identical proteins and their annotated locations for XP_011533070.1
- UniProtKB/TrEMBL
-
A0A2X0U4L4
- Conserved Domains (2) summary
-
- pfam00621
Location:405 → 583
- RhoGEF; RhoGEF domain
- cl17171
Location:615 → 679
- PH-like; Pleckstrin homology-like domain
-
XM_047422451.1 → XP_047278407.1  rho guanine nucleotide exchange factor 10 isoform X5
-
XM_011534770.3 → XP_011533072.1  rho guanine nucleotide exchange factor 10 isoform X13
See identical proteins and their annotated locations for XP_011533072.1
- UniProtKB/TrEMBL
-
A0A2X0U4L4
- Conserved Domains (2) summary
-
- pfam00621
Location:405 → 583
- RhoGEF; RhoGEF domain
- cl17171
Location:615 → 679
- PH-like; Pleckstrin homology-like domain
-
XM_047422460.1 → XP_047278416.1  rho guanine nucleotide exchange factor 10 isoform X14
-
XM_047422462.1 → XP_047278418.1  rho guanine nucleotide exchange factor 10 isoform X16
- Related
- ENSP00000427768.1, ENST00000522435.5
Reference GRCh38.p14 ALT_REF_LOCI_1
Genomic
-
NT_187576.1Â Reference GRCh38.p14 ALT_REF_LOCI_1
- Range
-
6676..142017
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054328834.1 → XP_054184809.1  rho guanine nucleotide exchange factor 10 isoform X10
-
XM_054328829.1 → XP_054184804.1  rho guanine nucleotide exchange factor 10 isoform X7
-
XM_054328826.1 → XP_054184801.1  rho guanine nucleotide exchange factor 10 isoform X4
-
XM_054328831.1 → XP_054184806.1  rho guanine nucleotide exchange factor 10 isoform X3
-
XM_054328833.1 → XP_054184808.1  rho guanine nucleotide exchange factor 10 isoform X9
-
XM_054328839.1 → XP_054184814.1  rho guanine nucleotide exchange factor 10 isoform X15
-
XM_054328825.1 → XP_054184800.1  rho guanine nucleotide exchange factor 10 isoform X4
-
XM_054328836.1 → XP_054184811.1  rho guanine nucleotide exchange factor 10 isoform X12
-
XM_054328832.1 → XP_054184807.1  rho guanine nucleotide exchange factor 10 isoform X9
-
XM_054328835.1 → XP_054184810.1  rho guanine nucleotide exchange factor 10 isoform X11
-
XM_054328823.1 → XP_054184798.1  rho guanine nucleotide exchange factor 10 isoform X2
- UniProtKB/Swiss-Prot
- O14665, O15013, Q2KHR8, Q68D55, Q8IWD9, Q8IY77
-
XM_054328824.1 → XP_054184799.1  rho guanine nucleotide exchange factor 10 isoform X3
-
XM_054328822.1 → XP_054184797.1  rho guanine nucleotide exchange factor 10 isoform X1
-
XM_054328830.1 → XP_054184805.1  rho guanine nucleotide exchange factor 10 isoform X8
-
XM_054328828.1 → XP_054184803.1  rho guanine nucleotide exchange factor 10 isoform X6
-
XM_054328827.1 → XP_054184802.1  rho guanine nucleotide exchange factor 10 isoform X5
-
XM_054328837.1 → XP_054184812.1  rho guanine nucleotide exchange factor 10 isoform X13
-
XM_054328838.1 → XP_054184813.1  rho guanine nucleotide exchange factor 10 isoform X14
-
XM_054328840.1 → XP_054184815.1  rho guanine nucleotide exchange factor 10 isoform X16
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1Â Alternate T2T-CHM13v2.0
- Range
-
1601800..1736745
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054361550.1 → XP_054217525.1  rho guanine nucleotide exchange factor 10 isoform X10
-
XM_054361545.1 → XP_054217520.1  rho guanine nucleotide exchange factor 10 isoform X7
-
XM_054361542.1 → XP_054217517.1  rho guanine nucleotide exchange factor 10 isoform X4
-
XM_054361547.1 → XP_054217522.1  rho guanine nucleotide exchange factor 10 isoform X3
-
XM_054361549.1 → XP_054217524.1  rho guanine nucleotide exchange factor 10 isoform X9
-
XM_054361555.1 → XP_054217530.1  rho guanine nucleotide exchange factor 10 isoform X15
-
XM_054361541.1 → XP_054217516.1  rho guanine nucleotide exchange factor 10 isoform X4
-
XM_054361552.1 → XP_054217527.1  rho guanine nucleotide exchange factor 10 isoform X12
-
XM_054361548.1 → XP_054217523.1  rho guanine nucleotide exchange factor 10 isoform X9
-
XM_054361551.1 → XP_054217526.1  rho guanine nucleotide exchange factor 10 isoform X11
-
XM_054361539.1 → XP_054217514.1  rho guanine nucleotide exchange factor 10 isoform X2
- UniProtKB/Swiss-Prot
- O14665, O15013, Q2KHR8, Q68D55, Q8IWD9, Q8IY77
-
XM_054361540.1 → XP_054217515.1  rho guanine nucleotide exchange factor 10 isoform X3
-
XM_054361538.1 → XP_054217513.1  rho guanine nucleotide exchange factor 10 isoform X1
-
XM_054361546.1 → XP_054217521.1  rho guanine nucleotide exchange factor 10 isoform X8
-
XM_054361544.1 → XP_054217519.1  rho guanine nucleotide exchange factor 10 isoform X6
-
XM_054361543.1 → XP_054217518.1  rho guanine nucleotide exchange factor 10 isoform X5
-
XM_054361553.1 → XP_054217528.1  rho guanine nucleotide exchange factor 10 isoform X13
-
XM_054361554.1 → XP_054217529.1  rho guanine nucleotide exchange factor 10 isoform X14
-
XM_054361556.1 → XP_054217531.1  rho guanine nucleotide exchange factor 10 isoform X16
RNA
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XR_008487897.1 RNA Sequence