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    ZNF829 zinc finger protein 829 [ Bos taurus (domestic cattle) ]

    Gene ID: 790881, updated on 4-Oct-2024

    Summary

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    Gene symbol
    ZNF829
    Gene description
    zinc finger protein 829
    See related
    BGD:BT27686; Ensembl:ENSBTAG00000050438
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human all
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    Genomic context

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    See ZNF829 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (47217775..47229755)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA25 Neighboring gene large ribosomal subunit protein uL22-like Neighboring gene zinc finger protein 568 Neighboring gene zinc finger protein 793 Neighboring gene uncharacterized LOC100848226 Neighboring gene zinc finger protein 585A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 829

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      47217775..47229755
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005219093.5 → XP_005219150.1  zinc finger protein 829 isoform X1

      See identical proteins and their annotated locations for XP_005219150.1

      UniProtKB/TrEMBL
      G3MY17
      Conserved Domains (3) summary
      smart00349
      Location:14 → 74
      KRAB; krueppel associated box
      COG5048
      Location:139 → 401
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:333 → 353
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_005219091.5 → XP_005219148.1  zinc finger protein 829 isoform X1

      See identical proteins and their annotated locations for XP_005219148.1

      UniProtKB/TrEMBL
      G3MY17
      Conserved Domains (3) summary
      smart00349
      Location:14 → 74
      KRAB; krueppel associated box
      COG5048
      Location:139 → 401
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:333 → 353
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_024978721.2 → XP_024834489.1  zinc finger protein 829 isoform X1

      UniProtKB/TrEMBL
      G3MY17
      Conserved Domains (3) summary
      smart00349
      Location:14 → 74
      KRAB; krueppel associated box
      COG5048
      Location:139 → 401
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:333 → 353
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_005219090.5 → XP_005219147.1  zinc finger protein 829 isoform X1

      See identical proteins and their annotated locations for XP_005219147.1

      UniProtKB/TrEMBL
      G3MY17
      Related
      ENSBTAP00000054443.3, ENSBTAT00000064085.3
      Conserved Domains (3) summary
      smart00349
      Location:14 → 74
      KRAB; krueppel associated box
      COG5048
      Location:139 → 401
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:333 → 353
      ZF_C2H2; C2H2 Zn finger [structural motif]

    5. XM_005219089.5 → XP_005219146.1  zinc finger protein 829 isoform X1

      See identical proteins and their annotated locations for XP_005219146.1

      UniProtKB/TrEMBL
      G3MY17
      Conserved Domains (3) summary
      smart00349
      Location:14 → 74
      KRAB; krueppel associated box
      COG5048
      Location:139 → 401
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:333 → 353
      ZF_C2H2; C2H2 Zn finger [structural motif]

    6. XM_005219092.5 → XP_005219149.1  zinc finger protein 829 isoform X1

      See identical proteins and their annotated locations for XP_005219149.1

      UniProtKB/TrEMBL
      G3MY17
      Conserved Domains (3) summary
      smart00349
      Location:14 → 74
      KRAB; krueppel associated box
      COG5048
      Location:139 → 401
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:333 → 353
      ZF_C2H2; C2H2 Zn finger [structural motif]

    7. XM_015458132.3 → XP_015313618.1  zinc finger protein 829 isoform X2

      Conserved Domains (2) summary
      COG5048
      Location:66 → 328
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:260 → 280
      ZF_C2H2; C2H2 Zn finger [structural motif]

    8. XM_024978722.2 → XP_024834490.1  zinc finger protein 829 isoform X2

      Conserved Domains (2) summary
      COG5048
      Location:66 → 328
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:260 → 280
      ZF_C2H2; C2H2 Zn finger [structural motif]

    9. XM_059877071.1 → XP_059733054.1  zinc finger protein 829 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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