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    c5h6orf118 chromosome 5 C6orf118 homolog [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 779868, updated on 4-Nov-2024

    Summary

    Official Symbol
    c5h6orf118provided by Xenbase
    Official Full Name
    chromosome 5 C6orf118 homologprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-974228
    See related
    Ensembl:ENSXETG00000005368 AllianceGenome:Xenbase:XB-GENE-974228
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    c6orf118
    Summary
    Orthologous to human C6orf118 (chromosome 6 open reading frame 118). [provided by Alliance of Genome Resources, Nov 2024]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
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    Genomic context

    See c5h6orf118 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (54801289..54814221, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (58192569..58247282, complement)

    Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene QKI, KH domain containing, RNA binding Neighboring gene deleted in malignant brain tumors 1 protein Neighboring gene phosphodiesterase 10A Neighboring gene T, brachyury homolog, gene 2

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    uncharacterized protein C6orf118 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001078946.1NP_001072414.1  uncharacterized protein C6orf118 homolog

      See identical proteins and their annotated locations for NP_001072414.1

      Status: PROVISIONAL

      Source sequence(s)
      BC121639
      UniProtKB/TrEMBL
      F6QEB3, Q0V9C4
      Related
      ENSXETP00000011780.5, ENSXETT00000011780.5
      Conserved Domains (1) summary
      pfam15739
      Location:223316
      TSNAXIP1_N; Translin-associated factor X-interacting N-terminus

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      54801289..54814221 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)