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    PLAGL1 PLAG1 like zinc finger 1 [ Gallus gallus (chicken) ]

    Gene ID: 769676, updated on 10-Oct-2024

    Summary

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    Symbol
    PLAGL1provided by CGNC
    Full Name
    PLAG1 like zinc finger 1provided by CGNC
    Primary source
    CGNC:66631
    See related
    Ensembl:ENSGALG00010005588
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See PLAGL1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (51929078..51972612)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (51834283..51878393)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene T-cell activation RhoGTPase activating protein Neighboring gene radial spoke 3 homolog Neighboring gene uncharacterized LOC112532078 Neighboring gene zinc finger C2HC-type containing 1B Neighboring gene LTV1 ribosome biogenesis factor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone deacetylase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell fate commitment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein PLAGL1
    Names
    pleiomorphic adenoma gene-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      51929078..51972612
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046939737.1 → XP_046795693.1  zinc finger protein PLAGL1 isoform X2

    2. XM_015284207.4 → XP_015139693.2  zinc finger protein PLAGL1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XSL0, A0A8V0XV74
      Related
      ENSGALP00010007936.1, ENSGALT00010013385.1
      Conserved Domains (4) summary
      COG5189
      Location:328 → 410
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      COG5236
      Location:381 → 507
      COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      sd00017
      Location:307 → 327
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl40432
      Location:36 → 167
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

    3. XM_040698471.2 → XP_040554405.1  zinc finger protein PLAGL1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XSK0
      Conserved Domains (4) summary
      COG5189
      Location:212 → 294
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      COG5236
      Location:265 → 391
      COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      sd00017
      Location:191 → 211
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl40432
      Location:1 → 51
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

    4. XM_001232447.6 → XP_001232448.3  zinc finger protein PLAGL1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XSL0, A0A8V0XV74
      Related
      ENSGALP00010007929.1, ENSGALT00010013377.1
      Conserved Domains (4) summary
      COG5189
      Location:328 → 410
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      COG5236
      Location:381 → 507
      COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      sd00017
      Location:307 → 327
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl40432
      Location:36 → 167
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

    5. XM_046939736.1 → XP_046795692.1  zinc finger protein PLAGL1 isoform X2

      Related
      ENSGALP00010007926.1, ENSGALT00010013373.1

    6. XM_015284208.4 → XP_015139694.2  zinc finger protein PLAGL1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XSL0, A0A8V0XV74
      Conserved Domains (4) summary
      COG5189
      Location:328 → 410
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      COG5236
      Location:381 → 507
      COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      sd00017
      Location:307 → 327
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl40432
      Location:36 → 167
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

    7. XM_046939738.1 → XP_046795694.1  zinc finger protein PLAGL1 isoform X2

      Related
      ENSGALP00010007931.1, ENSGALT00010013380.1

    8. XM_046939739.1 → XP_046795695.1  zinc finger protein PLAGL1 isoform X2

    9. XM_046939741.1 → XP_046795697.1  zinc finger protein PLAGL1 isoform X2

    10. XM_046939742.1 → XP_046795698.1  zinc finger protein PLAGL1 isoform X2

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      51834283..51878393
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046915135.1 → XP_046771091.1  zinc finger protein PLAGL1 isoform X2

    2. XM_040669006.2 → XP_040524940.1  zinc finger protein PLAGL1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XV74
      Conserved Domains (4) summary
      COG5236
      Location:381 → 507
      COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      sd00017
      Location:307 → 327
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl40432
      Location:36 → 167
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
      pfam00096
      Location:363 → 385
      zf-C2H2; Zinc finger, C2H2 type

    3. XM_040669007.2 → XP_040524941.1  zinc finger protein PLAGL1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XSK0
      Conserved Domains (4) summary
      COG5189
      Location:212 → 294
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      COG5236
      Location:265 → 391
      COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      sd00017
      Location:191 → 211
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl40432
      Location:1 → 51
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

    4. XM_040669004.2 → XP_040524938.1  zinc finger protein PLAGL1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XV74
      Conserved Domains (4) summary
      COG5236
      Location:381 → 507
      COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      sd00017
      Location:307 → 327
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl40432
      Location:36 → 167
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
      pfam00096
      Location:363 → 385
      zf-C2H2; Zinc finger, C2H2 type

    5. XM_046915134.1 → XP_046771090.1  zinc finger protein PLAGL1 isoform X2

    6. XM_040669005.2 → XP_040524939.1  zinc finger protein PLAGL1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XV74
      Conserved Domains (4) summary
      COG5236
      Location:381 → 507
      COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      sd00017
      Location:307 → 327
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl40432
      Location:36 → 167
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
      pfam00096
      Location:363 → 385
      zf-C2H2; Zinc finger, C2H2 type

    7. XM_046915136.1 → XP_046771092.1  zinc finger protein PLAGL1 isoform X2

    8. XM_046915137.1 → XP_046771093.1  zinc finger protein PLAGL1 isoform X2

    9. XM_046915138.1 → XP_046771094.1  zinc finger protein PLAGL1 isoform X2

    10. XM_046915139.1 → XP_046771095.1  zinc finger protein PLAGL1 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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