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    CAPN14 calpain 14 [ Gallus gallus (chicken) ]

    Gene ID: 768684, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CAPN14provided by CGNC
    Official Full Name
    calpain 14provided by CGNC
    Primary source
    CGNC:6901
    See related
    Ensembl:ENSGALG00010017369
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    calpain-14
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    Genomic context

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    See CAPN14 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (7927940..7955086)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (7873404..7900446)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene stonin 1 Neighboring gene uncharacterized LOC112532054 Neighboring gene EH domain containing 3 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 14 Neighboring gene microRNA 1792 Neighboring gene uncharacterized LOC124418342

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calpain-14
    XP_040522530.1
    XP_040522531.1
    XP_040553431.1
    XP_046770430.1
    XP_046795026.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7927940..7955086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046939070.1 → XP_046795026.1  calpain-14 isoform X1

      UniProtKB/TrEMBL
      F1NGQ0
      Related
      ENSGALP00010024509.1, ENSGALT00010041898.1

    2. XM_040697497.2 → XP_040553431.1  calpain-14 isoform X2

      Conserved Domains (3) summary
      cd00214
      Location:171 → 326
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
      cd16195
      Location:348 → 513
      EFh_PEF_CAPN13_14; Penta-EF hand, calcium binding motifs, found in calpain-13 (CAPN13), calpain-14 (CAPN14), and similar proteins
      cl00051
      Location:9 → 165
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7873404..7900446
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040666596.2 → XP_040522530.1  calpain-14 isoform X1

      UniProtKB/TrEMBL
      F1NGQ0
      Conserved Domains (3) summary
      cd16195
      Location:526 → 691
      EFh_PEF_CAPN13_14; Penta-EF hand, calcium binding motifs, found in calpain-13 (CAPN13), calpain-14 (CAPN14), and similar proteins
      pfam00648
      Location:46 → 337
      Peptidase_C2; Calpain family cysteine protease
      pfam01067
      Location:358 → 495
      Calpain_III; Calpain large subunit, domain III

    2. XM_046914474.1 → XP_046770430.1  calpain-14 isoform X1

      UniProtKB/TrEMBL
      F1NGQ0

    3. XM_040666597.2 → XP_040522531.1  calpain-14 isoform X2

      Conserved Domains (3) summary
      cd00214
      Location:171 → 326
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
      cd16195
      Location:348 → 513
      EFh_PEF_CAPN13_14; Penta-EF hand, calcium binding motifs, found in calpain-13 (CAPN13), calpain-14 (CAPN14), and similar proteins
      cl00051
      Location:9 → 165
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
    Nucleotide Protein
    Heading Accession and Version

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