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    AP3B1 adaptor related protein complex 3 subunit beta 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 767602, updated on 18-Aug-2024

    Summary

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    Official Symbol
    AP3B1provided by VGNC
    Official Full Name
    adaptor related protein complex 3 subunit beta 1provided by VGNC
    Primary source
    VGNC:VGNC:25987
    See related
    BGD:BT19788; Ensembl:ENSBTAG00000005016
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See AP3B1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (9099553..9335423, complement)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene tubulin folding cofactor A Neighboring gene ataxin-3 Neighboring gene microRNA mir-2284z-1 Neighboring gene microRNA mir-2285v Neighboring gene secretory carrier membrane protein 1 Neighboring gene LHFPL tetraspan subfamily member 2 Neighboring gene uncharacterized LOC132346300

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ADP-Ribosylation factor 1 (ARF1) regulates recruitment of the AP-3 adaptor complex to membranes. Ooi CE, et al. J Cell Biol, 1998 Jul 27. PMID 9679139, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in anterograde synaptic vesicle transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of AP-3 adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of clathrin adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of membrane coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP-3 complex subunit beta-1
    Names
    adapter-related protein complex 3 subunit beta-1
    adaptor protein complex AP-3 beta-1 subunit
    adaptor protein complex AP-3 subunit beta-1
    adaptor related protein complex 3 beta 1 subunit
    beta-3A-adaptin
    beta3A-adaptin
    clathrin assembly protein complex 3 beta-1 large chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076534.1 → NP_001070002.1  AP-3 complex subunit beta-1

      See identical proteins and their annotated locations for NP_001070002.1

      Status: PROVISIONAL

      Source sequence(s)
      BC108129
      UniProtKB/Swiss-Prot
      Q32PG1
      UniProtKB/TrEMBL
      A0AAA9T073
      Related
      ENSBTAP00000006605.5, ENSBTAT00000006605.6
      Conserved Domains (5) summary
      pfam01602
      Location:46 → 585
      Adaptin_N; Adaptin N terminal region
      pfam12717
      Location:128 → 251
      Cnd1; non-SMC mitotic condensation complex subunit 1
      pfam14796
      Location:804 → 948
      AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
      pfam14797
      Location:708 → 771
      SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
      sd00044
      Location:116 → 144
      HEAT; HEAT repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      9099553..9335423 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010808844.3 → XP_010807146.1  AP-3 complex subunit beta-1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9S692, A0AAA9T073
      Related
      ENSBTAP00000080726.1, ENSBTAT00000096427.1
      Conserved Domains (5) summary
      pfam01602
      Location:46 → 625
      Adaptin_N; Adaptin N terminal region
      pfam12717
      Location:128 → 251
      Cnd1; non-SMC mitotic condensation complex subunit 1
      pfam14796
      Location:844 → 988
      AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
      pfam14797
      Location:748 → 811
      SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
      sd00044
      Location:116 → 144
      HEAT; HEAT repeat [structural motif]

    2. XM_059890677.1 → XP_059746660.1  AP-3 complex subunit beta-1 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1N1C0
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q32PG1.1 GenPept UniProtKB/Swiss-Prot:Q32PG1

    Gene LinkOut

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