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    GANAB glucosidase II alpha subunit [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718672, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GANABprovided by VGNC
    Official Full Name
    glucosidase II alpha subunitprovided by VGNC
    Primary source
    VGNC:VGNC:72879
    Locus tag
    EGK_06108
    See related
    Ensembl:ENSMMUG00000018117
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GANAB in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (11553504..11578550)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (11662384..11687766)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene chromosome 14 C11orf98 homolog Neighboring gene LBH domain containing 1 Neighboring gene integrator complex subunit 5 Neighboring gene uncharacterized LOC114672244 Neighboring gene beta-1,3-glucuronyltransferase 3 Neighboring gene retinal outer segment membrane protein 1 Neighboring gene EMAP like 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glucan 1,3-alpha-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in N-glycan processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of glucosidase II complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neutral alpha-glucosidase AB
    NP_001181640.1
    XP_001116402.1
    XP_028688692.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194711.1 → NP_001181640.1  neutral alpha-glucosidase AB precursor

      See identical proteins and their annotated locations for NP_001181640.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000104
      UniProtKB/TrEMBL
      A0A1D5Q4S6, A0A5S6R9M7, A0A8J8YKQ6, F7FGD1, G7NCT6
      Related
      ENSMMUP00000043040.2, ENSMMUT00000078181.2
      Conserved Domains (3) summary
      cd06603
      Location:406 → 873
      GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
      cd14752
      Location:266 → 406
      GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
      pfam01055
      Location:387 → 832
      Glyco_hydro_31; Glycosyl hydrolases family 31

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      11553504..11578550
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028832859.1 → XP_028688692.1  neutral alpha-glucosidase AB isoform X2

      Conserved Domains (3) summary
      cd06603
      Location:143 → 610
      GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
      cd14752
      Location:3 → 143
      GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
      pfam17137
      Location:586 → 655
      DUF5110; Domain of unknown function (DUF5110)

    2. XM_001116402.4 → XP_001116402.1  neutral alpha-glucosidase AB isoform X1

      See identical proteins and their annotated locations for XP_001116402.1

      UniProtKB/TrEMBL
      F6RVK6, F7FGD1, I0FJQ4
      Related
      ENSMMUP00000037372.3, ENSMMUT00000044356.3
      Conserved Domains (3) summary
      cd06603
      Location:384 → 851
      GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
      cd14752
      Location:244 → 384
      GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
      pfam01055
      Location:365 → 810
      Glyco_hydro_31; Glycosyl hydrolases family 31
    Nucleotide Protein
    Heading Accession and Version

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