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    ATRN attractin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717374, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATRNprovided by VGNC
    Official Full Name
    attractinprovided by VGNC
    Primary source
    VGNC:VGNC:70194
    See related
    Ensembl:ENSMMUG00000022283
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATRN in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (62837725..63014536, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (36332801..36513446)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000461 Neighboring gene ADAM metallopeptidase domain 33 Neighboring gene GDNF family receptor alpha 4 Neighboring gene splicing factor 3A subunit 3 pseudogene Neighboring gene beta-galactoside alpha-2,6-sialyltransferase 1 pseudogene Neighboring gene uncharacterized LOC107000484

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    attractin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      62837725..63014536 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149430.2 → XP_015004916.2  attractin isoform X1

      UniProtKB/TrEMBL
      F6X837, F6X848, I2CXR9
      Related
      ENSMMUP00000029334.4, ENSMMUT00000031349.4
      Conserved Domains (7) summary
      cd03597
      Location:789 → 921
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:328 → 492
      PHA03098; kelch-like protein; Provisional
      PRK14131
      Location:559 → 634
      PRK14131; N-acetylneuraminate epimerase
      cd00041
      Location:133 → 248
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1063 → 1108
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:502 → 551
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:933 → 984
      PSI; Plexin repeat

    2. XM_015149432.2 → XP_015004918.2  attractin isoform X3

      UniProtKB/TrEMBL
      A0A5F8AVC3
      Related
      ENSMMUP00000081188.1, ENSMMUT00000099240.1
      Conserved Domains (7) summary
      cd03597
      Location:789 → 921
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:328 → 492
      PHA03098; kelch-like protein; Provisional
      PRK14131
      Location:559 → 634
      PRK14131; N-acetylneuraminate epimerase
      cd00041
      Location:133 → 248
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1063 → 1108
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:502 → 551
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:933 → 984
      PSI; Plexin repeat

    3. XM_015149431.2 → XP_015004917.2  attractin isoform X2

      UniProtKB/TrEMBL
      A0A5F8ASQ0, A0A5F8AVC3
      Related
      ENSMMUP00000080439.1, ENSMMUT00000083682.1
      Conserved Domains (7) summary
      cd03597
      Location:789 → 921
      CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
      PHA03098
      Location:328 → 492
      PHA03098; kelch-like protein; Provisional
      PRK14131
      Location:559 → 634
      PRK14131; N-acetylneuraminate epimerase
      cd00041
      Location:133 → 248
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00055
      Location:1063 → 1108
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      sd00038
      Location:502 → 551
      Kelch; KELCH repeat [structural motif]
      pfam01437
      Location:933 → 984
      PSI; Plexin repeat
    Nucleotide Protein
    Heading Accession and Version

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